RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA638724", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA638724 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9538130 9538130 PRJNA638724_P_NODE_4908_length_286_cov_2.535211_g4822_i0 PRJNA638724 4908 286 2.535211 7.25070346 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 440 4.829999999999998e-119   NTclustered gi|681870004|gb|KM001687.1| 1542451 g4822 i0 99.587 55.8776223776224 242 0 85 1 1 242 241 1 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 15981 440 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
23562203 23562203 PRJNA638724_P_NODE_5699_length_268_cov_5.071795_g5613_i0 PRJNA638724 5699 268 5.071795 13.5924106 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 468 2.06e-127   NTclustered gi|681870004|gb|KM001687.1| 1542451 g5613 i0 98.496 4.96268656716418 266 2 99 1 4 267 1163 1428 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 1330 468 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;