RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA638724", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA638724 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16458082 16458082 PRJNA638724_P_NODE_4793_length_289_cov_2.662037_g4707_i0 PRJNA638724 4793 289 2.662037 7.69328693 Armatimonadota 67819 Bacteria Bacteria 272 1.89e-68   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g4707 i0 86.275 229.0276816609 255 29 87 6 25 276 37127 37378 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 66189 272 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus
25381698 25381698 PRJNA638724_P_NODE_7640_length_238_cov_2.442424_g7554_i0 PRJNA638724 7640 238 2.442424 5.81296912 Fimbriimonas 1005038 Bacteria Bacteria 270 5.42e-68   NTclustered gi|663071213|gb|CP007139.1| 661478 g7554 i0 88.21 108.798319327731 229 24 96 2 1 228 28390 28616 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 25894 270 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;