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contig_metadata

31 rows where bioproject = "PRJNA638138" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 31 ✖

bioproject 1

  • PRJNA638138 · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4437078 4437078 PRJNA638138_P_NODE_22444_length_249_cov_0.875000_g22229_i0 PRJNA638138 22444 249 0.875 2.17875 Caudoviricetes sp. 2832643 Viruses Viruses 90.9 3.66e-19   NR XOS27498.1 2832643 g22229 i0 56.1 0.987951807228916 82 35 97.6 1 7 249 115 196 XOS27498.1 MAG: hypothetical protein MSP0001_306 [Caudoviricetes sp.] diamond 246 90.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
8262506 8262506 PRJNA638138_P_NODE_15047_length_282_cov_1.239234_g14832_i0 PRJNA638138 15047 282 1.239234 3.49463988 Sonafor virus 3131557 Viruses Viruses 311 3.89e-80   NTclustered gi|2717322811|gb|PP173858.1| 3131557 g14832 i0 87.004 128.085106382979 277 35 98 1 1 276 2779 3055 MAG: Sonafor virus isolate SN1_k141_345389 genomic sequence blastn 36120 311 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sonafor virus
8262646 8262646 PRJNA638138_P_NODE_26747_length_246_cov_1.335260_g26532_i0 PRJNA638138 26747 246 1.33526 3.2847396 Caudoviricetes sp. 2832643 Viruses Viruses 455 1.4500000000000002e-123   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g26532 i0 100 1 246 0 100 0 1 246 47359 47604 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 246 455 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
9538062 9538062 PRJNA638138_P_NODE_36308_length_212_cov_2.964029_g36093_i0 PRJNA638138 36308 212 2.964029 6.28374148 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 121 5.04e-23   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g36093 i0 100 4.88207547169811 65 0 59 0 14 78 71 7 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 1035 121 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
12088672 12088672 PRJNA638138_P_NODE_13410_length_295_cov_2.364865_g13195_i0 PRJNA638138 13410 295 2.364865 6.97635175 Potexvirus trifolii 3433859 Viruses Viruses 438 1.8e-118   NTclustered gi|1078555000|dbj|LC190455.1| 12188 g13195 i0 93.814 14.8949152542373 291 18 99 0 5 295 627 337 White clover mosaic virus CP gene for coat protein, complete cds, isolate: Namwon blastn 4394 438 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
14638405 14638405 PRJNA638138_P_NODE_35232_length_241_cov_0.916667_g35017_i0 PRJNA638138 35232 241 0.916667 2.20916747 Inoviridae sp. 2219103 Viruses Viruses 141 4.5e-29   NTclustered gi|2906148891|gb|PQ646422.1| 2219103 g35017 i0 87.2 0.518672199170125 125 15 52 1 117 241 1297 1420 MAG: Inoviridae sp. isolate k127_665380 genomic sequence blastn 125 141 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
15912455 15912455 PRJNA638138_P_NODE_9673_length_335_cov_1.175573_g9458_i0 PRJNA638138 9673 335 1.175573 3.93816955 Caudoviricetes sp. 2832643 Viruses Viruses 619 6.91e-173   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g9458 i0 100 1 335 0 100 0 1 335 30256 30590 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 335 619 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
18461509 18461509 PRJNA638138_P_NODE_28135_length_246_cov_0.890173_g27920_i0 PRJNA638138 28135 246 0.890173 2.18982558 Caudoviricetes sp. 2832643 Viruses Viruses 449 6.74e-122   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g27920 i0 99.593 1 246 1 100 0 1 246 41726 41481 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 246 449 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19736153 19736153 PRJNA638138_P_NODE_27116_length_246_cov_0.890173_g26901_i0 PRJNA638138 27116 246 0.890173 2.18982558 Caudoviricetes sp. 2832643 Viruses Viruses 455 1.4500000000000002e-123   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g26901 i0 100 1 246 0 100 0 1 246 27099 27344 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 246 455 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19736230 19736230 PRJNA638138_P_NODE_33516_length_242_cov_0.911243_g33301_i0 PRJNA638138 33516 242 0.911243 2.20520806 Caudoviricetes sp. 2832643 Viruses Viruses 431 2.4e-116   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g33301 i0 98.76 1 242 3 100 0 1 242 46025 45784 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 242 431 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
22286617 22286617 PRJNA638138_P_NODE_4538_length_457_cov_1.203125_g4324_i0 PRJNA638138 4538 457 1.203125 5.49828125 Galium odoratum potexvirus 2738917 Viruses Viruses 614 4.509999999999998e-171   NTclustered gi|1845309154|gb|MN814316.1| 2738917 g4324 i0 90.989 20.9824945295405 455 41 99 0 1 455 3023 3477 Galium odoratum potexvirus strain pt040-lat-5, complete genome blastn 9589 614 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Galium odoratum potexvirus
23561987 23561987 PRJNA638138_P_NODE_22199_length_249_cov_0.875000_g21984_i0 PRJNA638138 22199 249 0.875 2.17875 Caudoviricetes sp. 2832643 Viruses Viruses 189 1.6499999999999999e-43   NTclustered gi|2915049361|gb|OR222830.1| 2832643 g21984 i0 82.063 68.6104417670683 223 38 89 2 26 247 4947 4726 MAG: Caudoviricetes sp. isolate MSP0527 genomic sequence blastn 17084 189 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24835562 24835562 PRJNA638138_P_NODE_13320_length_296_cov_1.381166_g13105_i0 PRJNA638138 13320 296 1.381166 4.08825136 Caudoviricetes sp. 2832643 Viruses Viruses 547 2.8799999999999986e-151   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g13105 i0 100 1 296 0 100 0 1 296 48037 47742 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 296 547 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24835682 24835682 PRJNA638138_P_NODE_24220_length_248_cov_0.880000_g24005_i0 PRJNA638138 24220 248 0.88 2.1824 Potexvirus trifolii 3433859 Viruses Viruses 353 5.49e-93   NTclustered gi|1843793411|gb|MN399740.1| 12188 g24005 i0 92.339 19.9758064516129 248 19 100 0 1 248 4121 3874 White clover mosaic virus isolate Muenster_18 RNA replication protein, triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds blastn 4954 353 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
26827978 26827978 PRJNA638138_P_NODE_27561_length_246_cov_0.890173_g27346_i0 PRJNA638138 27561 246 0.890173 2.18982558 Pseudomonas phage vB_PsaM_M1 2995601 Viruses Viruses 84.7 5.14e-19   NR UZS00871.1 2995601 g27346 i0 47.6 1 82 43 100 0 1 246 25 106 UZS00871.1 hypothetical protein [Pseudomonas phage vB_PsaM_M1] diamond 246 84.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Andersonviridae   Pseudomonas phage vB_PaeM_M1
26891411 26891411 PRJNA638138_P_NODE_3941_length_487_cov_1.101449_g3727_i0 PRJNA638138 3941 487 1.101449 5.36405663 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 66.2 2.38e-9   NR DAC81252.1 2609866 g3727 i0 50.9 1.01642710472279 55 27 33.9 0 321 485 1 55 DAC81252.1 TPA_asm: integrase [Astyanax tetra cavefish adintovirus] diamond 495 66.6 0.993993993993994 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus
27397223 27397223 PRJNA638138_P_NODE_2523_length_599_cov_0.931559_g2311_i0 PRJNA638138 2523 599 0.931559 5.58003841 Adintovirus anguilla10665 3115889 Viruses Viruses 242 4.76e-76   NR DBA49779.1 3115889 g2311 i0 60.5 2.85475792988314 190 75 95.2 0 570 1 159 348 DBA49779.1 MAG TPA_asm: Integrase [Adintovirus anguilla10665] diamond 1710 242 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
27554702 27554702 PRJNA638138_P_NODE_21724_length_250_cov_0.870056_g21509_i0 PRJNA638138 21724 250 0.870056 2.17514 Microbacterium phage Rasputia 2762419 Viruses Viruses 47 4.36e-4   NR QNJ55926.1 2762419 g21509 i0 39.2 0.888 74 39 88.8 2 222 1 25 92 QNJ55926.1 HNH endonuclease [Microbacterium phage Rasputia] diamond 222 47 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Rogerhendrixvirus Microbacterium phage Rasputia
28028678 28028678 PRJNA638138_P_NODE_20605_length_250_cov_0.870056_g20390_i0 PRJNA638138 20605 250 0.870056 2.17514 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 42 0.0223   NR DAC81258.1 2609866 g20390 i0 58.1 0.372 31 13 37.2 0 95 3 33 63 DAC81258.1 TPA_asm: gasderminX [Astyanax tetra cavefish adintovirus] diamond 93 42 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus
28691830 28691830 PRJNA638138_P_NODE_23567_length_249_cov_0.875000_g23352_i0 PRJNA638138 23567 249 0.875 2.17875 Larimichthys croaker adintovirus 2609857 Viruses Viruses 62.4 2.01e-9   NR DAC81316.1 2609857 g23352 i0 42.9 0.674698795180723 56 32 67.5 0 247 80 81 136 DAC81316.1 TPA_asm: FtsK [Larimichthys croaker adintovirus] diamond 168 62.4 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Larimichthys croaker adintovirus
29070700 29070700 PRJNA638138_P_NODE_27728_length_246_cov_0.890173_g27513_i0 PRJNA638138 27728 246 0.890173 2.18982558 Adintovirus pavo15764 3115938 Viruses Viruses 66.2 6.5500000000000006e-11   NR DBA50340.1 3115938 g27513 i0 71.4 0.853658536585366 35 10 42.7 0 140 244 52 86 DBA50340.1 MAG TPA_asm: PacK [Adintovirus pavo15764] diamond 210 66.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus pavo15764
29449149 29449149 PRJNA638138_P_NODE_25250_length_247_cov_1.034483_g25035_i0 PRJNA638138 25250 247 1.034483 2.55517301 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 75.5 3.31e-14   NR DAC81253.1 2609866 g25035 i0 66 0.607287449392713 50 17 60.7 0 151 2 1 50 DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] diamond 150 75.5 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus
29954666 29954666 PRJNA638138_P_NODE_8911_length_345_cov_1.466912_g8696_i0 PRJNA638138 8911 345 1.466912 5.0608464 Adintovirus anguilla10665 3115889 Viruses Viruses 82.8 4.89e-17   NR DBA49783.1 3115889 g8696 i0 50 0.678260869565217 78 39 67.8 0 1 234 104 181 DBA49783.1 MAG TPA_asm: Adenain [Adintovirus anguilla10665] diamond 234 82.8 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
30491800 30491800 PRJNA638138_P_NODE_33993_length_242_cov_0.911243_g33778_i0 PRJNA638138 33993 242 0.911243 2.20520806 Prokaryotic dsDNA virus sp. 2591644 Viruses Viruses 54.3 3.09e-6   NR QDP52494.1 2591644 g33778 i0 34.2 0.979338842975207 79 51 96.7 1 239 6 662 740 QDP52494.1 MAG: hypothetical protein Unbinned1606contig1000_53 [Prokaryotic dsDNA virus sp.] diamond 237 54.3 1 Viruses               Prokaryotic dsDNA virus sp.
30776216 30776216 PRJNA638138_P_NODE_4954_length_439_cov_2.040984_g4740_i0 PRJNA638138 4954 439 2.040984 8.95991976 Adintovirus anguilla10665 3115889 Viruses Viruses 97.1 6.339999999999999e-23   NR DBA49785.1 3115889 g4740 i0 61.3 0.5125284738041 75 29 51.3 0 1 225 37 111 DBA49785.1 MAG TPA_asm: GasderminX [Adintovirus anguilla10665] diamond 225 97.1 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
31629670 31629670 PRJNA638138_P_NODE_2716_length_580_cov_0.962525_g2504_i0 PRJNA638138 2716 580 0.962525 5.582645 Adintovirus anguilla10665 3115889 Viruses Viruses 134 5.259999999999998e-35   NR DAC81257.1 3115889 g2504 i0 45.9 0.76551724137931 148 73 72.9 1 579 157 106 253 DAC81257.1 TPA_asm: acintoc2 [Astyanax tetra cavefish adintovirus] diamond 444 134 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
31673621 31673621 PRJNA638138_P_NODE_27417_length_246_cov_0.890173_g27202_i0 PRJNA638138 27417 246 0.890173 2.18982558 Viruses 10239 Viruses Viruses 44.3 0.0117   NR XBY85611.1 3229033 g27202 i0 51.4 1.28048780487805 35 17 42.7 0 246 142 412 446 XBY85611.1 MAG: RNA-dependent RNA polymerase [Exserohilum turcicum mymonavirus 1] diamond 315 44.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae   Exserohilum turcicum mymonavirus 1
31756138 31756138 PRJNA638138_P_NODE_18457_length_256_cov_0.983607_g18242_i0 PRJNA638138 18457 256 0.983607 2.51803392 Larimichthys croaker adintovirus 2609857 Viruses Viruses 86.7 1.53e-17   NR DBA47698.1 2609857 g18242 i0 69.8 6.22265625 53 16 62.1 0 3 161 987 1039 DBA47698.1 MAG TPA_asm: PolBb [Adintovirus homo13306] diamond 1593 87.4 0.991990846681922 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Larimichthys croaker adintovirus
32009282 32009282 PRJNA638138_P_NODE_1198_length_831_cov_1.100264_g1010_i0 PRJNA638138 1198 831 1.100264 9.14319384 Adintovirus anguilla10665 3115889 Viruses Viruses 128 7.61e-32   NR DBA49780.1 3115889 g1010 i0 52.4 0.447653429602888 124 57 44.4 2 765 397 109 231 DBA49780.1 MAG TPA_asm: Penton [Adintovirus anguilla10665] diamond 372 128 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
32199151 32199151 PRJNA638138_P_NODE_4878_length_443_cov_0.897297_g4664_i0 PRJNA638138 4878 443 0.897297 3.97502571 Adintovirus anguilla10665 3115889 Viruses Viruses 136 5.6199999999999996e-34   NR DBA49787.1 3115889 g4664 i0 58.3 2.09255079006772 103 43 69.8 0 3 311 51 153 DBA49787.1 MAG TPA_asm: PolBb [Adintovirus anguilla10665] diamond 927 136 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
32779921 32779921 PRJNA638138_P_NODE_30040_length_244_cov_0.900585_g29825_i0 PRJNA638138 30040 244 0.900585 2.1974274 root 1 Root_unresolved Root_unresolved 43.1 0.0263   NR YP_009151614.1 1540091 g29825 i0 45.8 1.62295081967213 48 23 56.6 2 105 242 399 445 YP_009151614.1 tail fiber protein [Bacillus phage Moonbeam] diamond 396 43.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae Moonbeamvirus Moonbeamvirus moonbeam

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;