RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA638138", tax_clade = "Opisthokonta" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA638138 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18461501 18461501 PRJNA638138_P_NODE_27375_length_246_cov_0.890173_g27160_i0 PRJNA638138 27375 246 0.890173 2.18982558 Anneissia japonica 1529436 Echinodermata other_Eukaryota 195 3.49e-45   NTclustered gi|1826641786|ref|XM_033253094.1| 1529436 g27160 i0 81.624 17.630081300813 234 43 95 0 1 234 74 307 PREDICTED: Anneissia japonica 40S ribosomal protein S3 (LOC117110397), mRNA blastn 4337 195 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
27334044 27334044 PRJNA638138_P_NODE_25843_length_247_cov_0.885057_g25628_i0 PRJNA638138 25843 247 0.885057 2.18609079 Asterias rubens 7604 Echinodermata other_Eukaryota 43.1 0.028   NR XP_033636947.1 7604 g25628 i0 47.9 0.582995951417004 48 23 58.3 1 78 221 308 353 XP_033636947.1 tyrosine-protein kinase SYK-like [Asterias rubens] diamond 144 43.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29954662 29954662 PRJNA638138_P_NODE_24331_length_248_cov_0.880000_g24116_i0 PRJNA638138 24331 248 0.88 2.1824 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 66.2 2.13e-10   NR KAJ8036953.1 206669 g24116 i0 43.2 0.979838709677419 81 43 98 2 247 5 541 618 KAJ8036953.1 ATP-dependent DNA helicase PIF1 [Holothuria leucospilota] diamond 243 66.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;