RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA638138", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA638138 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28817572 28817572 PRJNA638138_P_NODE_17028_length_266_cov_1.580311_g16813_i0 PRJNA638138 17028 266 1.580311 4.20362726 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 42.7 0.0472   NR MFQ5668180.1 2838779 g16813 i0 41 0.879699248120301 78 41 83.5 3 248 27 300 376 MFQ5668180.1 acyl-CoA dehydrogenase family protein [Candidatus Binatia bacterium] diamond 234 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32798937 32798937 PRJNA638138_P_NODE_17440_length_263_cov_1.568421_g17225_i0 PRJNA638138 17440 263 1.568421 4.12494723 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 76.6 2.67e-15   NR HJY82301.1 2838779 g17225 i0 48.8 0.935361216730038 82 42 93.5 0 257 12 4 85 HJY82301.1 DUF3368 domain-containing protein [Candidatus Binatia bacterium] diamond 246 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;