contig_metadata
19 rows where bioproject = "PRJNA637328" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 608974 | 608974 | PRJNA637328_P_NODE_16381_length_252_cov_2.886700_g15904_i0 | PRJNA637328 | 16381 | 252 | 2.8867 | 7.274484 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 132 | 5.67e-36 | NR | HEY7090713.1 | 2876886 | g15904 | i0 | 79.7 | 0.94047619047619 | 79 | 16 | 94 | 0 | 14 | 250 | 1 | 79 | HEY7090713.1 5'/3'-nucleotidase SurE [Tepidisphaeraceae bacterium] | diamond | 237 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 1155175 | 1155175 | PRJNA637328_P_NODE_6041_length_358_cov_2.271845_g5566_i0 | PRJNA637328 | 6041 | 358 | 2.271845 | 8.1332051 | root | 1 | Root_unresolved | Root_unresolved | 187 | 8.909999999999998e-43 | NTclustered | gi|2916079367|gb|CP137543.1| | 83554 | g5566 | i0 | 90.714 | 76.3128491620112 | 140 | 13 | 80 | 0 | 1 | 140 | 469422 | 469561 | Chlamydia psittaci strain LS-2203 chromosome, complete genome | blastn | 27320 | 187 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia psittaci | |
| 1155187 | 1155187 | PRJNA637328_S_NODE_2401_length_209_cov_1.703488_g2324_i0 | PRJNA637328 | 2401 | 209 | 1.703488 | 3.56028992 | Gemmata | 113 | Bacteria | Bacteria | 342 | 9.709999999999999e-90 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g2324 | i0 | 96.172 | 115.851674641148 | 209 | 8 | 100 | 0 | 1 | 209 | 3635600 | 3635392 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 24213 | 342 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 3159934 | 3159934 | PRJNA637328_P_NODE_16583_length_251_cov_4.024752_g16106_i0 | PRJNA637328 | 16583 | 251 | 4.024752 | 10.10212752 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 250 | 7.52e-62 | NTclustered | gi|226525261|gb|FJ872372.1| | 156588 | g16106 | i0 | 85.366 | 205.179282868526 | 246 | 31 | 97 | 5 | 3 | 245 | 11978 | 11735 | Uncultured Verrucomicrobia bacterium clone 106 genomic sequence | blastn | 51500 | 250 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 4983402 | 4983402 | PRJNA637328_S_NODE_3944_length_157_cov_0.975000_g3867_i0 | PRJNA637328 | 3944 | 157 | 0.975 | 1.53075 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 276 | 7.06e-70 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g3867 | i0 | 98.71 | 174.191082802548 | 155 | 2 | 99 | 0 | 1 | 155 | 5154276 | 5154430 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 27348 | 276 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 13363361 | 13363361 | PRJNA637328_S_NODE_1931_length_244_cov_1.478261_g1854_i0 | PRJNA637328 | 1931 | 244 | 1.478261 | 3.60695684 | Gemmata sp. SH-PL17 | 1630693 | Bacteria | Bacteria | 412 | 8.759999999999998e-111 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g1854 | i0 | 97.131 | 40.844262295082 | 244 | 7 | 100 | 0 | 1 | 244 | 560096 | 559853 | Gemmata sp. SH-PL17, complete genome | blastn | 9966 | 412 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 14638120 | 14638120 | PRJNA637328_S_NODE_1052_length_374_cov_2.192878_g975_i0 | PRJNA637328 | 1052 | 374 | 2.192878 | 8.20136372 | Frigoriglobus tundricola | 2774151 | Bacteria | Bacteria | 595 | 1.3099999999999996e-165 | NTclustered | gi|1870286614|gb|CP053452.2| | 2774151 | g975 | i0 | 95.676 | 604.545454545455 | 370 | 16 | 99 | 0 | 1 | 370 | 4959490 | 4959859 | Frigoriglobus tundricola strain PL17 chromosome, complete genome | blastn | 226100 | 595 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Frigoriglobus | Frigoriglobus tundricola | |
| 15183599 | 15183599 | PRJNA637328_S_NODE_1432_length_303_cov_2.101504_g1355_i0 | PRJNA637328 | 1432 | 303 | 2.101504 | 6.36755712 | Gemmataceae | 1914233 | Bacteria | Bacteria | 433 | 8.63e-117 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g1355 | i0 | 92.409 | 100.580858085809 | 303 | 23 | 100 | 0 | 1 | 303 | 1036166 | 1036468 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 30476 | 433 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 15183609 | 15183609 | PRJNA637328_S_NODE_3552_length_166_cov_1.186047_g3475_i0 | PRJNA637328 | 3552 | 166 | 1.186047 | 1.96883802 | Gemmataceae | 1914233 | Bacteria | Bacteria | 279 | 5.86e-71 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g3475 | i0 | 96.988 | 91.1024096385542 | 166 | 5 | 100 | 0 | 1 | 166 | 3633871 | 3633706 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 15123 | 279 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 16457876 | 16457876 | PRJNA637328_S_NODE_2653_length_197_cov_1.375000_g2576_i0 | PRJNA637328 | 2653 | 197 | 1.375 | 2.70875 | Gemmata | 113 | Bacteria | Bacteria | 309 | 9.17e-80 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g2576 | i0 | 94.924 | 207.832487309645 | 197 | 10 | 100 | 0 | 1 | 197 | 3633974 | 3634170 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 40943 | 309 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 22286036 | 22286036 | PRJNA637328_P_NODE_12778_length_271_cov_1.256757_g12302_i0 | PRJNA637328 | 12778 | 271 | 1.256757 | 3.40581147 | Neochlamydia sp. S13 | 1353976 | Bacteria | Bacteria | 233 | 8.27e-57 | NTclustered | gi|1550189844|dbj|AP017977.1| | 1353976 | g12302 | i0 | 82.353 | 135.287822878229 | 272 | 44 | 99 | 4 | 2 | 271 | 792241 | 791972 | Neochlamydia sp. S13 DNA, complete genome | blastn | 36663 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia sp. S13 | |
| 27744663 | 27744663 | PRJNA637328_S_NODE_3984_length_156_cov_1.033613_g3907_i0 | PRJNA637328 | 3984 | 156 | 1.033613 | 1.61243628 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 40.8 | 0.0439 | NR | GIT06037.1 | 2026799 | g3907 | i0 | 50 | 0.769230769230769 | 40 | 18 | 76.9 | 1 | 19 | 138 | 29 | 66 | GIT06037.1 MAG: hypothetical protein CM1200mP29_14480 [Verrucomicrobiota bacterium] | diamond | 120 | 40.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27870572 | 27870572 | PRJNA637328_P_NODE_13505_length_266_cov_3.580645_g13029_i0 | PRJNA637328 | 13505 | 266 | 3.580645 | 9.5245157 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 119 | 3.71e-32 | NR | MEL0099990.1 | 2026771 | g13029 | i0 | 62.5 | 1.98496240601504 | 88 | 33 | 99.2 | 0 | 266 | 3 | 14 | 101 | MEL0099990.1 hypothetical protein [Opitutia bacterium] | diamond | 528 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 29828170 | 29828170 | PRJNA637328_P_NODE_17431_length_248_cov_1.507538_g16954_i0 | PRJNA637328 | 17431 | 248 | 1.507538 | 3.73869424 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 65.9 | 9.64e-11 | NR | MCC7014462.1 | 2026780 | g16954 | i0 | 64.4 | 3.22983870967742 | 45 | 16 | 54.4 | 0 | 239 | 105 | 58 | 102 | MCC7014462.1 hypothetical protein [Planctomycetota bacterium] | diamond | 801 | 65.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30365777 | 30365777 | PRJNA637328_P_NODE_7112_length_334_cov_1.224561_g6637_i0 | PRJNA637328 | 7112 | 334 | 1.224561 | 4.09003374 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 44.7 | 0.0194 | NR | HNX04777.1 | 2026772 | g6637 | i0 | 42.6 | 0.94311377245509 | 54 | 20 | 45.8 | 2 | 57 | 209 | 14 | 59 | HNX04777.1 prepilin peptidase [Opitutales bacterium] | diamond | 315 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 30460569 | 30460569 | PRJNA637328_P_NODE_10573_length_289_cov_2.079167_g10098_i0 | PRJNA637328 | 10573 | 289 | 2.079167 | 6.00879263 | Lacipirellulaceae bacterium | 2691534 | Bacteria | Bacteria | 182 | 6.09e-56 | NR | HEX5471787.1 | 2691534 | g10098 | i0 | 82.3 | 1.98269896193772 | 96 | 17 | 99.7 | 0 | 288 | 1 | 52 | 147 | HEX5471787.1 orotidine 5'-phosphate decarboxylase / HUMPS family protein [Lacipirellulaceae bacterium] | diamond | 573 | 182 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellulaceae bacterium | ||
| 30839286 | 30839286 | PRJNA637328_P_NODE_13134_length_268_cov_4.972603_g12658_i0 | PRJNA637328 | 13134 | 268 | 4.972603 | 13.32657604 | Lacipirellulaceae bacterium | 2691534 | Bacteria | Bacteria | 134 | 5.979999999999998e-35 | NR | HVT29988.1 | 2691534 | g12658 | i0 | 69.3 | 1.97014925373134 | 88 | 27 | 98.5 | 0 | 264 | 1 | 347 | 434 | HVT29988.1 CehA/McbA family metallohydrolase [Lacipirellulaceae bacterium] | diamond | 528 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellulaceae bacterium | ||
| 31389223 | 31389223 | PRJNA637328_P_NODE_20376_length_231_cov_2.901099_g19899_i0 | PRJNA637328 | 20376 | 231 | 2.901099 | 6.70153869 | Bacteria | 2 | Bacteria | Bacteria | 43.5 | 0.0171 | NR | PIE24439.1 | 2026780 | g19899 | i0 | 36.7 | 2.36363636363636 | 60 | 35 | 74 | 1 | 10 | 180 | 196 | 255 | PIE24439.1 MAG: hypothetical protein CSA62_03955 [Planctomycetota bacterium] | diamond | 546 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32199146 | 32199146 | PRJNA637328_P_NODE_19058_length_241_cov_2.916667_g18581_i0 | PRJNA637328 | 19058 | 241 | 2.916667 | 7.02916747 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 136 | 2.9199999999999996e-37 | NR | TXT18583.1 | 2026780 | g18581 | i0 | 98.8 | 0.995850622406639 | 80 | 1 | 99.6 | 0 | 1 | 240 | 12 | 91 | TXT18583.1 MAG: phosphonate transport system permease protein [Planctomycetota bacterium] | diamond | 240 | 136 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;