RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA637328", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA637328 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1885278 1885278 PRJNA637328_P_NODE_3782_length_454_cov_5.059259_g3309_i0 PRJNA637328 3782 454 5.059259 22.96903586 Corticium candelabrum 121492 Porifera other_Eukaryota 52.8 0.044   NTclustered gi|2664270513|ref|XM_062643680.1| 121492 g3309 i0 100 0.185022026431718 28 0 6 0 343 370 725 698 PREDICTED: Corticium candelabrum uncharacterized protein K02A2.6-like (LOC134176979), mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
28388275 28388275 PRJNA637328_S_NODE_1126_length_353_cov_2.645570_g1049_i0 PRJNA637328 1126 353 2.64557 9.3388621 Metazoa 33208 Porifera other_Eukaryota 132 3.74e-37   NR XP_065189697.1 27933 g1049 i0 61.5 13.6912181303116 104 40 88.4 0 351 40 31 134 XP_065189697.1 small ribosomal subunit protein eS17-like [Sycon ciliatum] diamond 4833 132 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;