contig_metadata
16 rows where bioproject = "PRJNA637328" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 609181 | 609181 | PRJNA637328_S_NODE_4221_length_151_cov_4.596491_g4144_i0 | PRJNA637328 | 4221 | 151 | 4.596491 | 6.94070141 | uncultured Pleurocapsales cyanobacterium | 183215 | Bacteria | Bacteria | 267 | 4.04e-67 | NTclustered | gi|745734118|gb|KM458372.1| | 183215 | g4144 | i0 | 98.675 | 113 | 151 | 1 | 99 | 1 | 1 | 150 | 237 | 387 | Uncultured Pleurocapsales cyanobacterium isolate OTU 00115 23S ribosomal RNA gene, partial sequence | blastn | 17063 | 267 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Pleurocapsales | uncultured Pleurocapsales cyanobacterium | |||
| 1155170 | 1155170 | PRJNA637328_P_NODE_3761_length_455_cov_6.657635_g3288_i0 | PRJNA637328 | 3761 | 455 | 6.657635 | 30.29223925 | Nostocales | 1161 | Bacteria | Bacteria | 652 | 0 | NTclustered | gi|1566846272|dbj|LC455652.1| | 77022 | g3288 | i0 | 92.747 | 271.789010989011 | 455 | 28 | 99 | 5 | 3 | 455 | 971 | 520 | Cylindrospermopsis raciborskii NIES-1262 gene for 23S ribosomal RNA, partial sequence | blastn | 123664 | 654 | 0.996941896024465 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Aphanizomenonaceae | Cylindrospermopsis | Cylindrospermopsis raciborskii | |
| 3159963 | 3159963 | PRJNA637328_P_NODE_17943_length_246_cov_1.035533_g17466_i0 | PRJNA637328 | 17943 | 246 | 1.035533 | 2.54741118 | Microcystis aeruginosa | 1126 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2719083847|gb|CP142375.1| | 3113711 | g17466 | i0 | 100 | 1 | 246 | 0 | 100 | 0 | 1 | 246 | 4411221 | 4411466 | Microcystis aeruginosa 1339 chromosome, complete genome | blastn | 246 | 455 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Microcystaceae | Microcystis | Microcystis aeruginosa | |
| 7532981 | 7532981 | PRJNA637328_S_NODE_1166_length_343_cov_5.173203_g1089_i0 | PRJNA637328 | 1166 | 343 | 5.173203 | 17.74408629 | Bacteria | 2 | Bacteria | Bacteria | 606 | 5.519999999999998e-169 | NTclustered | gi|105990319|gb|DQ514050.1| | 1211 | g1089 | i0 | 98.542 | 99.6822157434402 | 343 | 5 | 100 | 0 | 1 | 343 | 417 | 75 | Uncultured cyanobacterium clone 100M2_B9 16S ribosomal RNA gene, partial sequence | blastn | 34191 | 606 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 8262422 | 8262422 | PRJNA637328_S_NODE_1147_length_347_cov_2.312903_g1070_i0 | PRJNA637328 | 1147 | 347 | 2.312903 | 8.02577341 | Aliterella chasmolithica | 2739056 | Bacteria | Bacteria | 459 | 1.66e-124 | NTclustered | gi|1713066352|gb|MN243145.1| | 2599943 | g1070 | i0 | 90.517 | 123.619596541787 | 348 | 31 | 100 | 2 | 1 | 347 | 2355 | 2009 | Aliterella chasmolithica PJ S15 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 42896 | 459 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Aliterellaceae | Aliterella | Aliterella chasmolithica | |
| 8808036 | 8808036 | PRJNA637328_P_NODE_4087_length_436_cov_13.320413_g3613_i0 | PRJNA637328 | 4087 | 436 | 13.320413 | 58.07700068 | Microcystis | 1125 | Bacteria | Bacteria | 806 | 0 | NTclustered | gi|119352232|gb|EF121241.1| | 1126 | g3613 | i0 | 100 | 101 | 436 | 0 | 100 | 0 | 1 | 436 | 329 | 764 | Microcystis aeruginosa strain SPC 777 16S ribosomal RNA gene, partial sequence | blastn | 44036 | 806 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Microcystaceae | Microcystis | Microcystis aeruginosa | |
| 11358557 | 11358557 | PRJNA637328_S_NODE_2569_length_201_cov_2.426829_g2492_i0 | PRJNA637328 | 2569 | 201 | 2.426829 | 4.8779262900000004 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 209 | 9.8e-50 | NTclustered | gi|225696254|gb|FJ805921.1| | 259957 | g2492 | i0 | 85.572 | 96.7810945273632 | 201 | 27 | 99 | 2 | 1 | 200 | 2925 | 3124 | Uncultured Chroococcidiopsis sp. clone SA1_1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 19453 | 211 | 0.990521327014218 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 12088568 | 12088568 | PRJNA637328_P_NODE_8150_length_321_cov_2.088235_g7675_i0 | PRJNA637328 | 8150 | 321 | 2.088235 | 6.70323435 | Calothrix sp. PCC 6303 | 1170562 | Bacteria | Bacteria | 411 | 4.309999999999999e-110 | NTclustered | gi|485099151|ref|NR_102546.1| | 1170562 | g7675 | i0 | 91.864 | 160.498442367601 | 295 | 23 | 92 | 1 | 1 | 295 | 1204 | 1497 | Calothrix sp. PCC 6303 strain PCC 6303 23S ribosomal RNA, complete sequence | blastn | 51520 | 411 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Calotrichaceae | Calothrix | Calothrix sp. PCC 6303 | |
| 12634147 | 12634147 | PRJNA637328_P_NODE_1330_length_818_cov_8.014304_g124_i1 | PRJNA637328 | 1330 | 818 | 8.014304 | 65.55700672 | Microcystis | 1125 | Bacteria | Bacteria | 957 | 0 | NTclustered | gi|1861038582|dbj|LC557462.1| | 1126 | g124 | i1 | 88.433 | 134.591687041565 | 804 | 79 | 98 | 12 | 20 | 818 | 573 | 1367 | Microcystis aeruginosa NIES-104 gene for 23S rRNA, partial sequence | blastn | 110096 | 965 | 0.991709844559585 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Microcystaceae | Microcystis | Microcystis aeruginosa | |
| 13363208 | 13363208 | PRJNA637328_P_NODE_19031_length_241_cov_3.593750_g18554_i0 | PRJNA637328 | 19031 | 241 | 3.59375 | 8.6609375 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 333 | 6.919999999999998e-87 | NTclustered | gi|225696260|gb|FJ805927.1| | 259957 | g18554 | i0 | 91.701 | 124.995850622407 | 241 | 18 | 99 | 2 | 2 | 240 | 1780 | 2020 | Uncultured Chroococcidiopsis sp. clone AS3_3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 30124 | 333 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 17187163 | 17187163 | PRJNA637328_S_NODE_2774_length_192_cov_1.909677_g2697_i0 | PRJNA637328 | 2774 | 192 | 1.909677 | 3.66657984 | uncultured cyanobacterium | 1211 | Bacteria | Bacteria | 246 | 7.07e-61 | NTclustered | gi|1667280630|gb|MK968478.1| | 1211 | g2697 | i0 | 90.374 | 102.71875 | 187 | 18 | 97 | 0 | 1 | 187 | 106 | 292 | Uncultured cyanobacterium clone illumina26 16S ribosomal RNA gene, partial sequence | blastn | 19722 | 246 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 17733008 | 17733008 | PRJNA637328_P_NODE_6014_length_359_cov_2.012903_g5539_i0 | PRJNA637328 | 6014 | 359 | 2.012903 | 7.22632177 | Nostocales | 1161 | Bacteria | Bacteria | 538 | 2.1399999999999994e-148 | NTclustered | gi|1345606775|gb|MG968509.1| | 2081938 | g5539 | i0 | 94.134 | 168.052924791086 | 358 | 14 | 99 | 5 | 6 | 359 | 442 | 88 | Gloeotrichia ghosei UTEX LB 1921 23S ribosomal RNA gene, partial sequence | blastn | 60331 | 538 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Gloeotrichiaceae | Gloeotrichia | Gloeotrichia ghosei | |
| 21557023 | 21557023 | PRJNA637328_P_NODE_20457_length_230_cov_4.933702_g19980_i0 | PRJNA637328 | 20457 | 230 | 4.933702 | 11.3475146 | Chroococcales | 1118 | Bacteria | Bacteria | 425 | 1.05e-114 | NTclustered | gi|119352232|gb|EF121241.1| | 1126 | g19980 | i0 | 100 | 102 | 230 | 0 | 100 | 0 | 1 | 230 | 1355 | 1126 | Microcystis aeruginosa strain SPC 777 16S ribosomal RNA gene, partial sequence | blastn | 23460 | 425 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Microcystaceae | Microcystis | Microcystis aeruginosa | |
| 22286315 | 22286315 | PRJNA637328_S_NODE_2338_length_213_cov_2.755682_g2261_i0 | PRJNA637328 | 2338 | 213 | 2.755682 | 5.86960266 | Oscillatoria acuminata | 118323 | Bacteria | Bacteria | 305 | 1.3e-78 | NTclustered | gi|427998918|gb|CP003607.1| | 56110 | g2261 | i0 | 92.523 | 190.370892018779 | 214 | 15 | 100 | 1 | 1 | 213 | 2201280 | 2201067 | Oscillatoria acuminata PCC 6304, complete genome | blastn | 40549 | 305 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Oscillatoriaceae | Oscillatoria | Oscillatoria acuminata | |
| 30776210 | 30776210 | PRJNA637328_P_NODE_21354_length_220_cov_4.438596_g20877_i0 | PRJNA637328 | 21354 | 220 | 4.438596 | 9.7649112 | Trichodesmium sp. St18_bin1 | 2954180 | Bacteria | Bacteria | 55.5 | 5.55e-7 | NR | MDE5083781.1 | 2954180 | g20877 | i0 | 59.1 | 1.8 | 44 | 18 | 60 | 0 | 220 | 89 | 180 | 223 | MDE5083781.1 tetratricopeptide repeat protein [Trichodesmium sp. St18_bin1] | diamond | 396 | 55.5 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Trichodesmium | Trichodesmium sp. St18_bin1 | |
| 32040934 | 32040934 | PRJNA637328_P_NODE_22598_length_197_cov_4.459459_g22121_i0 | PRJNA637328 | 22598 | 197 | 4.459459 | 8.78513423 | Limnospira platensis | 118562 | Bacteria | Bacteria | 102 | 1.99e-26 | NR | MDV7390954.1 | 3080829 | g22121 | i0 | 82.5 | 0.959390862944162 | 63 | 11 | 95.9 | 0 | 6 | 194 | 32 | 94 | MDV7390954.1 hypothetical protein [Arthrospira platensis SPKY1] | diamond | 189 | 102 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Sirenicapillariaceae | Limnospira | Limnospira platensis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;