RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA637219", tax_phylum = "Perkinsozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA637219 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27713208 27713208 PRJNA637219_S_NODE_8764_length_179_cov_0.876923_g8719_i0 PRJNA637219 8764 179 0.876923 1.56969217 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00227   NR TEB19254.1 2494336 g8719 i0 42.4 1.10614525139665 66 30 97.2 2 178 5 56 121 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 198 45.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
32135927 32135927 PRJNA637219_S_NODE_5518_length_212_cov_2.153374_g5473_i0 PRJNA637219 5518 212 2.153374 4.56515288 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 67.8 1.79e-11   NR TEB19254.1 2494336 g5473 i0 62.3 0.75 53 20 75 0 44 202 211 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 159 67.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;