RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA637219" and tax_phylum = "Kitrinoviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA637219 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3159682 3159682 PRJNA637219_S_NODE_13203_length_165_cov_0.879310_g13158_i0 PRJNA637219 13203 165 0.87931 1.4508615 Alphaendornavirus helianthi 3426177 Viruses Viruses 305 9.59e-79   NTclustered gi|2204387938|gb|MT873524.1| 2184469 g13158 i0 100 3 165 0 100 0 1 165 1414 1578 Helianthus annuus alphaendornavirus isolate SpaEV1 polyprotein gene, complete cds blastn 495 305 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus helianthi
4436585 4436585 PRJNA637219_S_NODE_9044_length_177_cov_1.062500_g8999_i0 PRJNA637219 9044 177 1.0625 1.880625 Alphaendornavirus helianthi 3426177 Viruses Viruses 316 4.799999999999999e-82   NTclustered gi|2204387938|gb|MT873524.1| 2184469 g8999 i0 98.87 3 177 2 100 0 1 177 12886 12710 Helianthus annuus alphaendornavirus isolate SpaEV1 polyprotein gene, complete cds blastn 531 316 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus helianthi
5712389 5712389 PRJNA637219_S_NODE_13225_length_165_cov_0.862069_g13180_i0 PRJNA637219 13225 165 0.862069 1.42241385 Orthoflavivirus denguei 3052464 Viruses Viruses 276 7.52e-70   NTclustered gi|1031961899|gb|KU725664.1| 11060 g13180 i0 96.951 99.3939393939394 164 5 99 0 2 165 8673 8510 Dengue virus type 2 strain PDK53, complete genome blastn 16400 276 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus denguei
5712469 5712469 PRJNA637219_S_NODE_2125_length_311_cov_1.332061_g2080_i0 PRJNA637219 2125 311 1.332061 4.14270971 Alphaendornavirus helianthi 3426177 Viruses Viruses 564 3.02e-156   NTclustered gi|2204387938|gb|MT873524.1| 2184469 g2080 i0 99.357 3 311 2 100 0 1 311 8041 7731 Helianthus annuus alphaendornavirus isolate SpaEV1 polyprotein gene, complete cds blastn 933 564 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus helianthi
13363030 13363030 PRJNA637219_S_NODE_6971_length_195_cov_1.041096_g6926_i0 PRJNA637219 6971 195 1.041096 2.0301372 Alphaendornavirus helianthi 3426177 Viruses Viruses 327 2.5e-85   NTclustered gi|2204387938|gb|MT873524.1| 2184469 g6926 i0 96.939 3.01538461538462 196 5 100 1 1 195 11993 11798 Helianthus annuus alphaendornavirus isolate SpaEV1 polyprotein gene, complete cds blastn 588 327 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus helianthi
18460792 18460792 PRJNA637219_S_NODE_10635_length_167_cov_0.864407_g10590_i0 PRJNA637219 10635 167 0.864407 1.44355969 Alphaendornavirus helianthi 3426177 Viruses Viruses 219 1.3099999999999999e-52   NTclustered gi|2204387938|gb|MT873524.1| 2184469 g10590 i0 99.174 3.10778443113772 121 1 100 0 47 167 5257 5377 Helianthus annuus alphaendornavirus isolate SpaEV1 polyprotein gene, complete cds blastn 519 219 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus helianthi
21011270 21011270 PRJNA637219_S_NODE_6137_length_204_cov_1.651613_g6092_i0 PRJNA637219 6137 204 1.651613 3.36929052 Alphaendornavirus helianthi 3426177 Viruses Viruses 372 1.2e-98   NTclustered gi|1571847412|ref|NC_040799.1| 2184469 g6092 i0 99.51 3 204 1 100 0 1 204 13548 13345 Helianthus annuus alphaendornavirus isolate BJ, complete genome blastn 612 372 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus helianthi

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;