RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA637219", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

  • Pseudomonadati · 2 ✖

bioproject 1

  • PRJNA637219 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27238971 27238971 PRJNA637219_S_NODE_10683_length_167_cov_0.864407_g10638_i0 PRJNA637219 10683 167 0.864407 1.44355969 Acidobacteriota bacterium 1978231 Bacteria Bacteria 113 1.53e-27   NR MDQ3799626.1 1978231 g10638 i0 94.5 3.95209580838323 55 3 98.8 0 166 2 508 562 MDQ3799626.1 phosphoenolpyruvate carboxylase [Acidobacteriota bacterium] diamond 660 113 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28849269 28849269 PRJNA637219_S_NODE_10708_length_167_cov_0.864407_g10663_i0 PRJNA637219 10708 167 0.864407 1.44355969 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 76.3 2.02e-14   NR HXH95208.1 2651171 g10663 i0 61.4 3.07185628742515 57 19 97 1 163 2 225 281 HXH95208.1 M4 family metallopeptidase [Thermoanaerobaculia bacterium] diamond 513 76.3 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;