RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA637219" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA637219 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28672611 28672611 PRJNA637219_S_NODE_1827_length_331_cov_1.446809_g1782_i0 PRJNA637219 1827 331 1.446809 4.78893779 Gammaretrovirus 153135 Viruses Viruses 201 2.72e-57   NR NP_040333.1 11795 g1782 i0 93.6 9.96978851963746 110 7 99.7 0 331 2 645 754 NP_040333.1 RNA-dependent DNA polymerase, partial [Friend murine leukemia virus] diamond 3300 203 0.990147783251232 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31471661 31471661 PRJNA637219_S_NODE_1336_length_378_cov_1.802432_g1291_i0 PRJNA637219 1336 378 1.802432 6.81319296 Moloney murine leukemia virus 11801 Viruses Viruses 254 1.87e-75   NR NP_057933.2 11801 g1291 i0 100 4.88095238095238 123 0 97.6 0 9 377 1055 1177 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 1845 254 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;