RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA637219", tax_kingdom = "Methanobacteriati" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 1 ✖

tax_kingdom 1

  • Methanobacteriati · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA637219 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31673620 31673620 PRJNA637219_S_NODE_13457_length_164_cov_0.886957_g13412_i0 PRJNA637219 13457 164 0.886957 1.45460948 Halobacteriales 2235 Archaea Archaea 100 4.2199999999999997e-23   NR WP_338916219.1 2162630 g13412 i0 75.9 11.8536585365854 54 13 98.8 0 1 162 605 658 WP_338916219.1 MULTISPECIES: hydrogenase iron-sulfur subunit [Salinirubellus] diamond 1944 100 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Salinirubellus  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;