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contig_metadata

35 rows where bioproject = "PRJNA635874" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 35 ✖

bioproject 1

  • PRJNA635874 · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1883753 1883753 PRJNA635874_P_NODE_40302_length_268_cov_1.297436_g40155_i0 PRJNA635874 40302 268 1.297436 3.47712848 archaeon 1906665 Archaea Archaea 72.8 1.54e-14   NR RYY86203.1 1906665 g40155 i0 81.4 0.48134328358209 43 8 48.1 0 139 267 31 73 RYY86203.1 MAG: hypothetical protein EON63_06120 [archaeon] diamond 129 72.8 1 Archaea               archaeon
5710819 5710819 PRJNA635874_P_NODE_27365_length_314_cov_0.991701_g27218_i0 PRJNA635874 27365 314 0.991701 3.11394114 archaeon 1906665 Archaea Archaea 167 1.74e-51   NR RYH29492.1 1906665 g27218 i0 82.8 0.945859872611465 99 17 94.6 0 298 2 13 111 RYH29492.1 MAG: 50S ribosomal protein L30e [archaeon] diamond 297 167 1 Archaea               archaeon
8807446 8807446 PRJNA635874_P_NODE_38847_length_272_cov_1.547739_g38700_i0 PRJNA635874 38847 272 1.547739 4.20985008 archaeon 1906665 Archaea Archaea 102 3.18e-26   NR RYY82082.1 1906665 g38700 i0 84.6 0.573529411764706 52 8 57.4 0 272 117 48 99 RYY82082.1 MAG: hypothetical protein EON63_14080 [archaeon] diamond 156 102 1 Archaea               archaeon
15909635 15909635 PRJNA635874_P_NODE_15613_length_387_cov_1.691083_g15466_i0 PRJNA635874 15613 387 1.691083 6.54449121 archaeon 1906665 Archaea Archaea 251 6.86e-83   NR RYG65124.1 1906665 g15466 i0 94.5 0.992248062015504 128 7 99.2 0 385 2 85 212 RYG65124.1 MAG: 30S ribosomal protein S5 [archaeon] diamond 384 251 1 Archaea               archaeon
18459967 18459967 PRJNA635874_P_NODE_53055_length_249_cov_0.875000_g52908_i0 PRJNA635874 53055 249 0.875 2.17875 archaeon 1906665 Archaea Archaea 106 1.46e-25   NR RYH21653.1 1906665 g52908 i0 63.9 4 83 29 98.8 1 248 3 171 253 RYH21653.1 MAG: ATP-binding cassette domain-containing protein [archaeon] diamond 996 106 1 Archaea               archaeon
19735013 19735013 PRJNA635874_P_NODE_73476_length_241_cov_0.916667_g73329_i0 PRJNA635874 73476 241 0.916667 2.20916747 Salarchaeum japonicum 555573 Archaea Archaea 54.7 0.006   NTclustered gi|2124061129|gb|CP085324.1| 555573 g73329 i0 94.286 0.261410788381743 35 2 15 0 102 136 271608 271574 Salarchaeum japonicum strain JCM 16327 chromosome, complete genome blastn 63 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Salarchaeum Salarchaeum japonicum
22285022 22285022 PRJNA635874_P_NODE_57558_length_247_cov_0.885057_g57411_i0 PRJNA635874 57558 247 0.885057 2.18609079 Thermoplasmata archaeon 1906666 Archaea Archaea 52.8 0.022   NTclustered gi|2108430933|gb|CP070629.1| 1906666 g57411 i0 96.875 0.129554655870445 32 0 13 1 139 169 1119210 1119179 MAG: Thermoplasmata archaeon isolate bin983 chromosome blastn 32 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
23560518 23560518 PRJNA635874_P_NODE_55839_length_247_cov_1.770115_g55692_i0 PRJNA635874 55839 247 1.770115 4.37218405 archaeon 1906665 Archaea Archaea 65.1 8.8e-12   NR RYG97170.1 1906665 g55692 i0 62.3 1.62753036437247 53 16 60.7 2 246 97 19 70 RYG97170.1 MAG: hypothetical protein EON65_53280, partial [archaeon] diamond 402 65.1 1 Archaea               archaeon
26827941 26827941 PRJNA635874_P_NODE_37061_length_278_cov_1.282927_g36914_i0 PRJNA635874 37061 278 1.282927 3.56653706 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 57 1.42e-8   NR MFH7882523.1 3121606 g36914 i0 72.2 0.388489208633094 36 10 38.8 0 86 193 23 58 MFH7882523.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 108 57 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
27207178 27207178 PRJNA635874_P_NODE_71202_length_242_cov_0.911243_g71055_i0 PRJNA635874 71202 242 0.911243 2.20520806 Methanimicrococcus hacksteinii 3028293 Archaea Archaea 42.7 0.0376   NR WP_318786618.1 3028293 g71055 i0 32.5 0.954545454545455 77 39 93 2 236 12 683 748 WP_318786618.1 InlB B-repeat-containing protein, partial [Methanimicrococcus hacksteinii] diamond 231 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanimicrococcus Methanimicrococcus hacksteinii
27428888 27428888 PRJNA635874_P_NODE_66963_length_243_cov_0.905882_g66816_i0 PRJNA635874 66963 243 0.905882 2.20129326 archaeon 1906665 Archaea Archaea 80.5 7.19e-17   NR RYH09711.1 1906665 g66816 i0 61.2 1.81481481481481 67 26 82.7 0 206 6 10 76 RYH09711.1 MAG: hypothetical protein EON65_39895 [archaeon] diamond 441 80.5 1 Archaea               archaeon
27554682 27554682 PRJNA635874_P_NODE_63984_length_244_cov_0.900585_g63837_i0 PRJNA635874 63984 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 142 3.2899999999999996e-37   NR RYG70422.1 1906665 g63837 i0 84 0.995901639344262 81 13 99.6 0 2 244 509 589 RYG70422.1 MAG: hypothetical protein EON64_00215 [archaeon] diamond 243 142 1 Archaea               archaeon
28091629 28091629 PRJNA635874_P_NODE_57385_length_247_cov_0.885057_g57238_i0 PRJNA635874 57385 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 117 1.9799999999999996e-31   NR RYH30350.1 1906665 g57238 i0 70.7 1.80971659919028 75 22 91.1 0 22 246 58 132 RYH30350.1 MAG: hypothetical protein EON65_05480 [archaeon] diamond 447 117 1 Archaea               archaeon
28217697 28217697 PRJNA635874_P_NODE_34926_length_285_cov_1.051887_g34779_i0 PRJNA635874 34926 285 1.051887 2.99787795 Methanocaldococcus villosus 667126 Archaea Archaea 52 9.97e-6   NR WP_004592618.1 667126 g34779 i0 38 0.831578947368421 79 31 83.2 2 1 237 80 140 WP_004592618.1 30S ribosomal protein S19e [Methanocaldococcus villosus] diamond 237 52 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus villosus
28261858 28261858 PRJNA635874_P_NODE_33666_length_289_cov_1.069444_g33519_i0 PRJNA635874 33666 289 1.069444 3.09069316 Methanomicrobiales 2191 Archaea Archaea 55.5 1.85e-6   NR MCK9298840.1 90427 g33519 i0 35.6 5.59515570934256 73 47 75.8 0 54 272 146 218 MCK9298840.1 exo-alpha-sialidase [Methanoculleus sp.] diamond 1617 55.8 0.99462365591397806 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
28723237 28723237 PRJNA635874_P_NODE_61727_length_245_cov_0.895349_g61580_i0 PRJNA635874 61727 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 62.4 3.9e-9   NR MCQ2821662.1 1906665 g61580 i0 40 2.98775510204082 80 43 96.7 2 243 7 201 276 MCQ2821662.1 TLD domain-containing protein [archaeon] diamond 732 62.4 1 Archaea               archaeon
28880909 28880909 PRJNA635874_P_NODE_35468_length_283_cov_1.380952_g35321_i0 PRJNA635874 35468 283 1.380952 3.90809416 archaeon 1906665 Archaea Archaea 105 3.88e-25   NR RYG67299.1 1906665 g35321 i0 50 0.996466431095406 94 47 99.6 0 1 282 89 182 RYG67299.1 MAG: hypothetical protein EON64_07745, partial [archaeon] diamond 282 105 1 Archaea               archaeon
29070668 29070668 PRJNA635874_P_NODE_54488_length_248_cov_0.880000_g54341_i0 PRJNA635874 54488 248 0.88 2.1824 archaeon 1906665 Archaea Archaea 55.8 9.4e-7   NR RYH21652.1 1906665 g54341 i0 42.1 0.919354838709677 76 32 91.9 2 247 20 147 210 RYH21652.1 MAG: hypothetical protein EON65_20340 [archaeon] diamond 228 55.8 1 Archaea               archaeon
29070673 29070673 PRJNA635874_P_NODE_68048_length_243_cov_0.905882_g67901_i0 PRJNA635874 68048 243 0.905882 2.20129326 archaeon 1906665 Archaea Archaea 50.8 5.22e-5   NR RYG97829.1 1906665 g67901 i0 33.8 0.802469135802469 65 43 80.2 0 49 243 129 193 RYG97829.1 MAG: leucine-rich repeat domain-containing protein, partial [archaeon] diamond 195 50.8 1 Archaea               archaeon
29512335 29512335 PRJNA635874_P_NODE_27010_length_315_cov_1.272727_g26863_i0 PRJNA635874 27010 315 1.272727 4.00909005 archaeon 1906665 Archaea Archaea 175 8.95e-50   NR RYG65186.1 1906665 g26863 i0 88.5 0.990476190476191 104 12 99 0 314 3 286 389 RYG65186.1 MAG: hypothetical protein EON64_12455 [archaeon] diamond 312 175 1 Archaea               archaeon
29764931 29764931 PRJNA635874_P_NODE_41631_length_264_cov_1.209424_g41484_i0 PRJNA635874 41631 264 1.209424 3.19287936 Nanobdellota archaeon 2026764 Archaea Archaea 87.8 6.96e-18   NR MCA9485224.1 2026764 g41484 i0 44.3 1 88 49 100 0 264 1 220 307 MCA9485224.1 GTP-binding protein [Nanoarchaeota archaeon] diamond 264 87.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
30017895 30017895 PRJNA635874_P_NODE_54051_length_248_cov_0.880000_g53904_i0 PRJNA635874 54051 248 0.88 2.1824 Candidatus Poseidoniaceae archaeon 2666346 Archaea Archaea 41.2 0.0449   NR MDP6334034.1 2666346 g53904 i0 43.2 0.532258064516129 44 25 53.2 0 11 142 43 86 MDP6334034.1 hypothetical protein [Candidatus Poseidoniaceae archaeon] diamond 132 41.2 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae   Candidatus Poseidoniaceae archaeon
30080783 30080783 PRJNA635874_P_NODE_26432_length_318_cov_0.938776_g26285_i0 PRJNA635874 26432 318 0.938776 2.98530768 archaeon 1906665 Archaea Archaea 174 1.42e-51   NR RYH04926.1 1906665 g26285 i0 81 0.990566037735849 105 20 99.1 0 2 316 165 269 RYH04926.1 MAG: 50S ribosomal protein L10, partial [archaeon] diamond 315 174 1 Archaea               archaeon
30870841 30870841 PRJNA635874_P_NODE_57654_length_247_cov_0.885057_g57507_i0 PRJNA635874 57654 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 135 2.8299999999999996e-35   NR RYG62897.1 1906665 g57507 i0 67.1 0.995951417004049 82 27 99.6 0 2 247 383 464 RYG62897.1 MAG: hypothetical protein EON64_17020, partial [archaeon] diamond 246 135 1 Archaea               archaeon
31123251 31123251 PRJNA635874_P_NODE_72075_length_241_cov_0.916667_g71928_i0 PRJNA635874 72075 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 63.2 8.73e-11   NR RYG96209.1 1906665 g71928 i0 71.1 0.473029045643154 38 11 47.3 0 240 127 60 97 RYG96209.1 MAG: hypothetical protein EON65_54770, partial [archaeon] diamond 114 63.2 1 Archaea               archaeon
31218042 31218042 PRJNA635874_P_NODE_71935_length_241_cov_0.916667_g71788_i0 PRJNA635874 71935 241 0.916667 2.20916747 Methanobacteriota archaeon 2026739 Archaea Archaea 42.4 0.0446   NR MFH1835688.1 2026739 g71788 i0 40.8 0.609958506224066 49 29 61 0 5 151 125 173 MFH1835688.1 ATPase domain-containing protein [Methanobacteriota archaeon] diamond 147 42.4 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31281578 31281578 PRJNA635874_P_NODE_22255_length_339_cov_0.981203_g22108_i0 PRJNA635874 22255 339 0.981203 3.32627817 archaeon 1906665 Archaea Archaea 70.5 1.51e-11   NR MCQ2821662.1 1906665 g22108 i0 43.6 0.690265486725664 78 39 68.1 2 109 339 200 273 MCQ2821662.1 TLD domain-containing protein [archaeon] diamond 234 70.5 1 Archaea               archaeon
31408291 31408291 PRJNA635874_P_NODE_41576_length_264_cov_1.371728_g41429_i0 PRJNA635874 41576 264 1.371728 3.62136192 archaeon 1906665 Archaea Archaea 127 3.77e-36   NR RYG59363.1 1906665 g41429 i0 87.7 0.829545454545455 73 9 83 0 3 221 5 77 RYG59363.1 MAG: hypothetical protein EON64_20310, partial [archaeon] diamond 219 127 1 Archaea               archaeon
31439759 31439759 PRJNA635874_P_NODE_74116_length_241_cov_0.857143_g73969_i0 PRJNA635874 74116 241 0.857143 2.06571463 archaeon 1906665 Archaea Archaea 47 1.25e-4   NR RYG66316.1 1906665 g73969 i0 40 0.684647302904564 55 32 68.5 1 44 208 4 57 RYG66316.1 MAG: hypothetical protein EON64_10050 [archaeon] diamond 165 47 1 Archaea               archaeon
31945755 31945755 PRJNA635874_P_NODE_65637_length_244_cov_0.900585_g65490_i0 PRJNA635874 65637 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 62 6.24e-9   NR RYH23911.1 1906665 g65490 i0 43.2 0.995901639344262 81 29 99.6 2 244 2 393 456 RYH23911.1 MAG: hypothetical protein EON65_17390 [archaeon] diamond 243 62 1 Archaea               archaeon
31977510 31977510 PRJNA635874_P_NODE_17258_length_373_cov_1.010000_g17111_i0 PRJNA635874 17258 373 1.01 3.7673 archaeon 1906665 Archaea Archaea 208 2.08e-64   NR RYG65161.1 1906665 g17111 i0 77.4 0.997319034852547 124 27 99.7 1 1 372 202 324 RYG65161.1 MAG: hypothetical protein EON64_12505 [archaeon] diamond 372 208 1 Archaea               archaeon
32009257 32009257 PRJNA635874_P_NODE_48018_length_251_cov_0.865169_g47871_i0 PRJNA635874 48018 251 0.865169 2.17157419 archaeon 1906665 Archaea Archaea 48.1 5.59e-5   NR RYH14058.1 1906665 g47871 i0 59.2 0.585657370517928 49 17 58.6 1 3 149 24 69 RYH14058.1 MAG: hypothetical protein EON65_34240 [archaeon] diamond 147 48.1 1 Archaea               archaeon
32072497 32072497 PRJNA635874_P_NODE_47178_length_251_cov_0.865169_g47031_i0 PRJNA635874 47178 251 0.865169 2.17157419 archaeon 1906665 Archaea Archaea 169 9.41e-51   NR RYH13529.1 1906665 g47031 i0 98.8 0.99203187250996006 83 1 99.2 0 251 3 78 160 RYH13529.1 MAG: ribose-phosphate diphosphokinase [archaeon] diamond 249 169 1 Archaea               archaeon
32135894 32135894 PRJNA635874_P_NODE_17358_length_372_cov_1.030100_g17211_i0 PRJNA635874 17358 372 1.0301 3.831972 Nitrososphaera sp. 1971748 Archaea Archaea 110 3.72e-29   NR HXG07374.1 1971748 g17211 i0 68 0.604838709677419 75 24 60.5 0 74 298 2 76 HXG07374.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein [Nitrososphaera sp.] diamond 225 110 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32167622 32167622 PRJNA635874_P_NODE_6118_length_568_cov_1.945455_g5974_i0 PRJNA635874 6118 568 1.945455 11.0501844 archaeon 1906665 Archaea Archaea 254 4.53e-83   NR MCQ2821492.1 1906665 g5974 i0 70.4 1.96478873239437 186 55 98.2 0 566 9 13 198 MCQ2821492.1 50S ribosomal protein L15e [archaeon] diamond 1116 254 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;