RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA635874" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA635874 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7532457 7532457 PRJNA635874_P_NODE_45166_length_253_cov_2.888889_g45019_i0 PRJNA635874 45166 253 2.888889 7.30888917 root 1 Root_unresolved Root_unresolved 113 1.04e-20   NTclustered gi|2320802451|gb|OL423334.1| 45661 g45019 i0 89.773 7.90513833992095 88 9 35 0 44 131 9655 9568 Banana bract mosaic virus isolate 3-42, complete genome blastn 2000 113 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus musae
13361772 13361772 PRJNA635874_P_NODE_44131_length_257_cov_0.836957_g43984_i0 PRJNA635874 44131 257 0.836957 2.15097949 Betacoronavirus pandemicum 3418604 Viruses Viruses 84.2 8.29e-12   NTclustered gi|2165834194|emb|OV195900.1| 2697049 g43984 i0 94.545 46.9027237354086 55 1 21 2 125 178 30068 30015 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 12054 84.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;