RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA635874" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA635874 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29133807 29133807 PRJNA635874_P_NODE_50389_length_250_cov_0.870056_g50242_i0 PRJNA635874 50389 250 0.870056 2.17514 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.9 0.00521   NR MDD5174323.1 2035772 g50242 i0 42.6 1.296 54 30 64.8 1 17 178 50 102 MDD5174323.1 exosortase system-associated protein, TIGR04073 family [Candidatus Omnitrophota bacterium] diamond 324 43.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30365761 30365761 PRJNA635874_P_NODE_54532_length_248_cov_0.880000_g54385_i0 PRJNA635874 54532 248 0.88 2.1824 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 70.5 6.12e-12   NR MCM8759307.1 2035772 g54385 i0 46.2 1.92338709677419 78 40 94.4 1 1 234 116 191 MCM8759307.1 HRDC domain-containing protein [Candidatus Omnitrophota bacterium] diamond 477 70.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;