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contig_metadata

17 rows where bioproject = "PRJNA635874" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 17 ✖

tax_kingdom 1

bioproject 1

  • PRJNA635874 · 17 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1884317 1884317 PRJNA635874_P_NODE_64822_length_244_cov_0.900585_g64675_i0 PRJNA635874 64822 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 80.5 1.13e-15   NR WP_058866807.1 458033 g64675 i0 48.1 12.9098360655738 81 42 99.6 0 243 1 72 152 WP_058866807.1 radical SAM protein [Chloracidobacterium thermophilum] diamond 3150 80.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium thermophilum
9536814 9536814 PRJNA635874_P_NODE_72948_length_241_cov_0.916667_g72801_i0 PRJNA635874 72948 241 0.916667 2.20916747 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 131 9.049999999999999e-35   NR HEY0428781.1 2283092 g72801 i0 76.3 2.98755186721992 80 19 99.6 0 2 241 241 320 HEY0428781.1 radical SAM family heme chaperone HemW [Pyrinomonadaceae bacterium] diamond 720 131 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26669189 26669189 PRJNA635874_P_NODE_51481_length_249_cov_0.875000_g51334_i0 PRJNA635874 51481 249 0.875 2.17875 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 85.5 3.57e-17   NR HMT07525.1 2283092 g51334 i0 60.8 0.891566265060241 74 28 89.2 1 24 245 25 97 HMT07525.1 choice-of-anchor Q domain-containing protein [Pyrinomonadaceae bacterium] diamond 222 85.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26891383 26891383 PRJNA635874_P_NODE_62781_length_245_cov_0.895349_g62634_i0 PRJNA635874 62781 245 0.895349 2.19360505 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 51.6 2.8e-5   NR HZC43019.1 2052142 g62634 i0 37.3 1.88571428571429 83 45 93.1 1 14 241 104 186 HZC43019.1 PAS domain-containing protein [Acidobacteriaceae bacterium] diamond 462 51.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
28155037 28155037 PRJNA635874_P_NODE_67225_length_243_cov_0.905882_g67078_i0 PRJNA635874 67225 243 0.905882 2.20129326 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 80.1 2.6e-15   NR HSK62488.1 2283092 g67078 i0 75 0.641975308641975 52 13 64.2 0 86 241 6 57 HSK62488.1 galactose oxidase early set domain-containing protein [Pyrinomonadaceae bacterium] diamond 156 80.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28186145 28186145 PRJNA635874_P_NODE_54266_length_248_cov_0.880000_g54119_i0 PRJNA635874 54266 248 0.88 2.1824 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 63.5 6.99e-10   NR MET0753628.1 2283092 g54119 i0 96.7 0.362903225806452 30 1 36.3 0 247 158 193 222 MET0753628.1 twin-arginine translocase subunit TatC [Pyrinomonadaceae bacterium] diamond 90 63.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28280902 28280902 PRJNA635874_P_NODE_12586_length_422_cov_2.246418_g12439_i0 PRJNA635874 12586 422 2.246418 9.47988396 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 51.2 1.39e-4   NR HYX28426.1 2283092 g12439 i0 31.1 1.06635071090047 74 48 52.6 2 162 383 129 199 HYX28426.1 saposin domain-containing protein [Pyrinomonadaceae bacterium] diamond 450 51.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28691815 28691815 PRJNA635874_P_NODE_70447_length_242_cov_0.911243_g70300_i0 PRJNA635874 70447 242 0.911243 2.20520806 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 144 4.209999999999999e-40   NR MET0754273.1 2283092 g70300 i0 87.5 3.96694214876033 80 10 99.2 0 240 1 119 198 MET0754273.1 tyrosine-type recombinase/integrase [Pyrinomonadaceae bacterium] diamond 960 144 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30143809 30143809 PRJNA635874_P_NODE_72232_length_241_cov_0.916667_g72085_i0 PRJNA635874 72232 241 0.916667 2.20916747 Bryobacterales bacterium 2026791 Bacteria Bacteria 140 1.1800000000000001e-36   NR MBL8241830.1 2026791 g72085 i0 83.3 2.09128630705394 84 10 99.6 1 241 2 102 185 MBL8241830.1 pyrroloquinoline quinone-dependent dehydrogenase [Bryobacterales bacterium] diamond 504 140 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
30870839 30870839 PRJNA635874_P_NODE_54194_length_248_cov_0.880000_g54047_i0 PRJNA635874 54194 248 0.88 2.1824 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 119 2.39e-30   NR HVE56526.1 2283092 g54047 i0 70.7 0.991935483870968 82 24 99.2 0 248 3 99 180 HVE56526.1 M15 family metallopeptidase [Pyrinomonadaceae bacterium] diamond 246 119 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30915086 30915086 PRJNA635874_P_NODE_47814_length_251_cov_0.865169_g47667_i0 PRJNA635874 47814 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 52.4 1.49e-5   NR MBE21253.1 1978231 g47667 i0 65 1.01593625498008 40 14 47.8 0 124 5 47 86 MBE21253.1 hypothetical protein [Acidobacteriota bacterium] diamond 255 52.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31060717 31060717 PRJNA635874_P_NODE_61735_length_245_cov_0.895349_g61588_i0 PRJNA635874 61735 245 0.895349 2.19360505 Holophagae bacterium 2073116 Bacteria Bacteria 48.9 2.59e-4   NR PWB68978.1 2073116 g61588 i0 34.2 0.96734693877551 79 50 96.7 1 4 240 369 445 PWB68978.1 MAG: hypothetical protein C3F15_15745 [Holophagae bacterium] diamond 237 48.9 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae       Holophagae bacterium
31313288 31313288 PRJNA635874_P_NODE_68435_length_243_cov_0.905882_g68288_i0 PRJNA635874 68435 243 0.905882 2.20129326 Acidobacteriota bacterium 1978231 Bacteria Bacteria 127 1.8899999999999998e-34   NR MFB3904366.1 1978231 g68288 i0 82.5 2.96296296296296 80 14 98.8 0 241 2 102 181 MFB3904366.1 TerC family protein [Acidobacteriota bacterium] diamond 720 127 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31345034 31345034 PRJNA635874_P_NODE_58876_length_246_cov_0.890173_g58729_i0 PRJNA635874 58876 246 0.890173 2.18982558 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 109 2.58e-29   NR HJX26711.1 2651171 g58729 i0 81.7 0.731707317073171 60 11 73.2 0 245 66 12 71 HJX26711.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 180 109 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
32040916 32040916 PRJNA635874_P_NODE_70798_length_242_cov_0.911243_g70651_i0 PRJNA635874 70798 242 0.911243 2.20520806 Terriglobus sp. RCC_193 3239218 Bacteria Bacteria 42.4 0.0497   NR WP_371083002.1 3239218 g70651 i0 48.6 0.45867768595041303 37 19 45.9 0 168 58 184 220 WP_371083002.1 sensor domain-containing diguanylate cyclase [Terriglobus sp. RCC_193] diamond 111 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terriglobus Terriglobus sp. RCC_193
32798909 32798909 PRJNA635874_P_NODE_49200_length_250_cov_0.870056_g49053_i0 PRJNA635874 49200 250 0.870056 2.17514 Bryobacterales bacterium 2026791 Bacteria Bacteria 118 3e-29   NR MBL8241420.1 2026791 g49053 i0 88.9 0.756 63 7 75.6 0 249 61 407 469 MBL8241420.1 DUF1501 domain-containing protein [Bryobacterales bacterium] diamond 189 118 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
32830617 32830617 PRJNA635874_P_NODE_14140_length_403_cov_1.400000_g13993_i0 PRJNA635874 14140 403 1.4 5.642 Acidobacteriota bacterium 1978231 Bacteria Bacteria 123 1.18e-29   NR MDQ3816202.1 1978231 g13993 i0 46.6 0.990074441687345 133 71 99 0 2 400 200 332 MDQ3816202.1 hypothetical protein [Acidobacteriota bacterium] diamond 399 123 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;