RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA635874", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA635874 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27851420 27851420 PRJNA635874_P_NODE_41324_length_265_cov_1.203125_g41177_i0 PRJNA635874 41324 265 1.203125 3.18828125 Gammaretrovirus 153135 Viruses Viruses 169 1.72e-46   NR NP_057933.2 11801 g41177 i0 96.6 12.9509433962264 88 3 99.6 0 265 2 1171 1258 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 3432 169 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
29733269 29733269 PRJNA635874_P_NODE_19610_length_355_cov_1.457447_g19463_i0 PRJNA635874 19610 355 1.457447 5.17393685 Moloney murine leukemia virus 11801 Viruses Viruses 242 2.09e-71   NR NP_057933.2 11801 g19463 i0 100 5.9830985915493 118 0 99.7 0 355 2 1051 1168 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 2124 242 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;