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contig_metadata

7 rows where bioproject = "PRJNA635874" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

bioproject 1

  • PRJNA635874 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19735013 19735013 PRJNA635874_P_NODE_73476_length_241_cov_0.916667_g73329_i0 PRJNA635874 73476 241 0.916667 2.20916747 Salarchaeum japonicum 555573 Archaea Archaea 54.7 0.006   NTclustered gi|2124061129|gb|CP085324.1| 555573 g73329 i0 94.286 0.261410788381743 35 2 15 0 102 136 271608 271574 Salarchaeum japonicum strain JCM 16327 chromosome, complete genome blastn 63 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Salarchaeum Salarchaeum japonicum
22285022 22285022 PRJNA635874_P_NODE_57558_length_247_cov_0.885057_g57411_i0 PRJNA635874 57558 247 0.885057 2.18609079 Thermoplasmata archaeon 1906666 Archaea Archaea 52.8 0.022   NTclustered gi|2108430933|gb|CP070629.1| 1906666 g57411 i0 96.875 0.129554655870445 32 0 13 1 139 169 1119210 1119179 MAG: Thermoplasmata archaeon isolate bin983 chromosome blastn 32 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27207178 27207178 PRJNA635874_P_NODE_71202_length_242_cov_0.911243_g71055_i0 PRJNA635874 71202 242 0.911243 2.20520806 Methanimicrococcus hacksteinii 3028293 Archaea Archaea 42.7 0.0376   NR WP_318786618.1 3028293 g71055 i0 32.5 0.954545454545455 77 39 93 2 236 12 683 748 WP_318786618.1 InlB B-repeat-containing protein, partial [Methanimicrococcus hacksteinii] diamond 231 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanimicrococcus Methanimicrococcus hacksteinii
28217697 28217697 PRJNA635874_P_NODE_34926_length_285_cov_1.051887_g34779_i0 PRJNA635874 34926 285 1.051887 2.99787795 Methanocaldococcus villosus 667126 Archaea Archaea 52 9.97e-6   NR WP_004592618.1 667126 g34779 i0 38 0.831578947368421 79 31 83.2 2 1 237 80 140 WP_004592618.1 30S ribosomal protein S19e [Methanocaldococcus villosus] diamond 237 52 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus villosus
28261858 28261858 PRJNA635874_P_NODE_33666_length_289_cov_1.069444_g33519_i0 PRJNA635874 33666 289 1.069444 3.09069316 Methanomicrobiales 2191 Archaea Archaea 55.5 1.85e-6   NR MCK9298840.1 90427 g33519 i0 35.6 5.59515570934256 73 47 75.8 0 54 272 146 218 MCK9298840.1 exo-alpha-sialidase [Methanoculleus sp.] diamond 1617 55.8 0.99462365591397806 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
30017895 30017895 PRJNA635874_P_NODE_54051_length_248_cov_0.880000_g53904_i0 PRJNA635874 54051 248 0.88 2.1824 Candidatus Poseidoniaceae archaeon 2666346 Archaea Archaea 41.2 0.0449   NR MDP6334034.1 2666346 g53904 i0 43.2 0.532258064516129 44 25 53.2 0 11 142 43 86 MDP6334034.1 hypothetical protein [Candidatus Poseidoniaceae archaeon] diamond 132 41.2 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae   Candidatus Poseidoniaceae archaeon
31218042 31218042 PRJNA635874_P_NODE_71935_length_241_cov_0.916667_g71788_i0 PRJNA635874 71935 241 0.916667 2.20916747 Methanobacteriota archaeon 2026739 Archaea Archaea 42.4 0.0446   NR MFH1835688.1 2026739 g71788 i0 40.8 0.609958506224066 49 29 61 0 5 151 125 173 MFH1835688.1 ATPase domain-containing protein [Methanobacteriota archaeon] diamond 147 42.4 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;