RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA635874", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA635874 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
608196 608196 PRJNA635874_P_NODE_6881_length_541_cov_1.527778_g6736_i0 PRJNA635874 6881 541 1.527778 8.26527898 Theromyzon tessulatum 13286 Annelida Annelida 197 1.0999999999999999e-58   NR AAN28680.1 13286 g6736 i0 58.7 1.02033271719039 184 63 95.4 7 14 529 169 351 AAN28680.1 cathepsin L [Theromyzon tessulatum] diamond 552 197 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Theromyzon Theromyzon tessulatum
4435940 4435940 PRJNA635874_P_NODE_69884_length_242_cov_0.911243_g69737_i0 PRJNA635874 69884 242 0.911243 2.20520806 Hirudo verbana 311461 Annelida Annelida 52.8 0.022   NTclustered gi|2918369621|emb|OZ237783.1| 311461 g69737 i0 87.5 0.198347107438017 48 3 19 3 41 85 9420302 9420349 Hirudo verbana genome assembly, chromosome: 5 blastn 48 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
18459905 18459905 PRJNA635874_P_NODE_50015_length_250_cov_0.870056_g49868_i0 PRJNA635874 50015 250 0.870056 2.17514 Hirudo verbana 311461 Annelida Annelida 52.8 0.023   NTclustered gi|2918369702|emb|OZ237787.1| 311461 g49868 i0 100 0.112 28 0 11 0 6 33 7302554 7302527 Hirudo verbana genome assembly, chromosome: 9 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
19733992 19733992 PRJNA635874_P_NODE_33636_length_289_cov_1.203704_g33489_i0 PRJNA635874 33636 289 1.203704 3.47870456 Hirudo verbana 311461 Annelida Annelida 56.5 0.002   NTclustered gi|2918369643|emb|OZ237784.1| 311461 g33489 i0 100 0.200692041522491 30 0 10 0 236 265 11996326 11996297 Hirudo verbana genome assembly, chromosome: 6 blastn 58 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;