RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA635874", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA635874 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28817545 28817545 PRJNA635874_P_NODE_48668_length_250_cov_0.870056_g48521_i0 PRJNA635874 48668 250 0.870056 2.17514 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 120 2.12e-30   NR MFA7483830.1 3107663 g48521 i0 67.1 0.984 82 27 98.4 0 3 248 80 161 MFA7483830.1 transposase [Vulcanimicrobiota bacterium] diamond 246 120 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
32736301 32736301 PRJNA635874_P_NODE_58640_length_246_cov_0.890173_g58493_i0 PRJNA635874 58640 246 0.890173 2.18982558 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 89.7 1.73e-19   NR MFA5507926.1 3107663 g58493 i0 56.9 0.878048780487805 72 31 87.8 0 30 245 1 72 MFA5507926.1 type 1 glutamine amidotransferase [Vulcanimicrobiota bacterium] diamond 216 89.7 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;