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contig_metadata

21 rows where bioproject = "PRJNA635874", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 21 ✖

tax_clade 1

  • Sar · 21 ✖

bioproject 1

  • PRJNA635874 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4436061 4436061 PRJNA635874_P_NODE_7484_length_523_cov_2.800000_g7338_i0 PRJNA635874 7484 523 2.8 14.644 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 170 2.33e-50   NR DBA01302.1 4803 g7338 i0 59.2 8.16252390057361 142 52 78.6 2 39 449 42 182 DBA01302.1 TPA: hypothetical protein N0F65_001807 [Lagenidium giganteum] diamond 4269 171 0.994152046783626 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
13908318 13908318 PRJNA635874_P_NODE_27891_length_311_cov_1.915966_g27744_i0 PRJNA635874 27891 311 1.915966 5.95865426 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 152 4.02e-41   NR RHZ16721.1 112090 g27744 i0 67 17.8263665594855 103 34 99.4 0 3 311 143 245 RHZ16721.1 hypothetical protein DYB31_004085 [Aphanomyces astaci] diamond 5544 152 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
14635774 14635774 PRJNA635874_P_NODE_17512_length_370_cov_2.602694_g17365_i0 PRJNA635874 17512 370 2.602694 9.6299678 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 102 8.529999999999999e-23   NR DAZ92868.1 4803 g17365 i0 73.7 3.68918918918919 76 19 60.8 1 229 5 3 78 DAZ92868.1 TPA: hypothetical protein N0F65_003047 [Lagenidium giganteum] diamond 1365 102 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
15909862 15909862 PRJNA635874_P_NODE_2313_length_822_cov_1.965287_g2193_i0 PRJNA635874 2313 822 1.965287 16.15465914 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 229 2.39e-71   NR GLD96418.1 114742 g2193 i0 60.2 6.52919708029197 186 67 67.9 1 822 265 25 203 GLD96418.1 hypothetical protein PINS_up005101 [Pythium insidiosum] diamond 5367 229 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
18458895 18458895 PRJNA635874_P_NODE_13815_length_407_cov_1.278443_g13668_i0 PRJNA635874 13815 407 1.278443 5.20326301 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 130 2.07e-35   NR TMW64003.1 41045 g13668 i0 65.8 1.73218673218673 114 39 84 0 5 346 1 114 TMW64003.1 hypothetical protein Poli38472_014708 [Pythium oligandrum] diamond 705 130 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
18458913 18458913 PRJNA635874_P_NODE_14515_length_398_cov_4.341538_g14368_i0 PRJNA635874 14515 398 4.341538 17.27932124 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 180 1.0099999999999995e-55   NR RHY06028.1 112090 g14368 i0 71.9 0.912060301507538 121 34 91.2 0 366 4 19 139 RHY06028.1 hypothetical protein DYB25_001794 [Aphanomyces astaci] diamond 363 180 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
18459045 18459045 PRJNA635874_P_NODE_18975_length_359_cov_1.479021_g18828_i0 PRJNA635874 18975 359 1.479021 5.30968539 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 168 7.559999999999999e-46   NR KAJ8552402.1 4785 g18828 i0 76.4 21.142061281337 110 26 91.9 0 28 357 681 790 KAJ8552402.1 hypothetical protein ON010_g10144 [Phytophthora cinnamomi] diamond 7590 169 0.994082840236686 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
18459405 18459405 PRJNA635874_P_NODE_31875_length_295_cov_1.387387_g31728_i0 PRJNA635874 31875 295 1.387387 4.09279165 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 175 9.81e-50   NR KAJ8575517.1 4785 g31728 i0 90.8 40.8203389830508 98 9 99.7 0 1 294 315 412 KAJ8575517.1 hypothetical protein ON010_g3696 [Phytophthora cinnamomi] diamond 12042 176 0.994318181818182 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
19734153 19734153 PRJNA635874_P_NODE_38996_length_272_cov_1.211055_g38849_i0 PRJNA635874 38996 272 1.211055 3.2940696 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 191 5.07e-44   NTclustered gi|673019759|ref|XM_008865619.1| 157072 g38849 i0 79.705 20.2610294117647 271 50 99 5 2 270 457 190 Aphanomyces invadans 40S ribosomal protein S23 mRNA blastn 5511 191 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
21009191 21009191 PRJNA635874_P_NODE_15897_length_385_cov_0.983974_g15750_i0 PRJNA635874 15897 385 0.983974 3.7882999 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 149 1.4e-43   NR TMW58359.1 41045 g15750 i0 63.2 2.51688311688312 117 43 91.2 0 376 26 2 118 TMW58359.1 hypothetical protein Poli38472_009918 [Pythium oligandrum] diamond 969 149 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
27030174 27030174 PRJNA635874_P_NODE_55482_length_248_cov_0.880000_g55335_i0 PRJNA635874 55482 248 0.88 2.1824 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 69.3 1.73e-11   NR KAF1773067.1 29920 g55335 i0 45.6 4.75403225806452 79 43 95.6 0 2 238 902 980 KAF1773067.1 Leucine-rich repeat domain, L domain-like [Phytophthora cactorum] diamond 1179 69.7 0.994261119081779 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
28249354 28249354 PRJNA635874_P_NODE_17026_length_375_cov_1.019868_g16879_i0 PRJNA635874 17026 375 1.019868 3.824505 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 137 6.46e-35   NR DAZ93677.1 4803 g16879 i0 56.3 4.968 126 53 99.2 2 3 374 222 347 DAZ93677.1 TPA: hypothetical protein N0F65_008185 [Lagenidium giganteum] diamond 1863 137 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28407456 28407456 PRJNA635874_P_NODE_22926_length_335_cov_1.175573_g22779_i0 PRJNA635874 22926 335 1.175573 3.93816955 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 51.6 7.63e-5   NR KAG9412244.1 112091 g22779 i0 34.6 0.725373134328358 81 50 72.5 2 279 37 110 187 KAG9412244.1 hypothetical protein AC1031_015185 [Aphanomyces cochlioides] diamond 243 51.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
28672600 28672600 PRJNA635874_P_NODE_17147_length_374_cov_0.976744_g17000_i0 PRJNA635874 17147 374 0.976744 3.65302256 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 114 4.160000000000001e-27   NR DAZ94117.1 4803 g17000 i0 44.4 3.71390374331551 124 65 99.5 2 374 3 27 146 DAZ94117.1 TPA: hypothetical protein N0F65_008981 [Lagenidium giganteum] diamond 1389 114 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28798586 28798586 PRJNA635874_P_NODE_19667_length_355_cov_1.092199_g19520_i0 PRJNA635874 19667 355 1.092199 3.87730645 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 112 4.380000000000001e-27   NR GLD98450.1 114742 g19520 i0 60 3.82816901408451 90 34 76.1 1 354 85 156 243 GLD98450.1 hypothetical protein PINS_up007147 [Pythium insidiosum] diamond 1359 112 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30776182 30776182 PRJNA635874_P_NODE_49434_length_250_cov_0.870056_g49287_i0 PRJNA635874 49434 250 0.870056 2.17514 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00467   NR KAF1334365.1 82926 g49287 i0 34.1 1.02 85 31 99.6 2 1 249 700 761 KAF1334365.1 Phosphatidylinositol-3-phosphate5-kinase, partial [Globisporangium splendens] diamond 255 45.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
31376704 31376704 PRJNA635874_P_NODE_4836_length_624_cov_2.339383_g4693_i0 PRJNA635874 4836 624 2.339383 14.59774992 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 202 4.97e-58   NR GLD99359.1 114742 g4693 i0 75.9 3.45673076923077 145 32 69.7 2 600 166 441 582 GLD99359.1 hypothetical protein PINS_up008078 [Pythium insidiosum] diamond 2157 202 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
31471628 31471628 PRJNA635874_P_NODE_39636_length_270_cov_1.228426_g39489_i0 PRJNA635874 39636 270 1.228426 3.3167502 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 60.8 1.44e-8   NR GLD99793.1 114742 g39489 i0 40 12 90 31 100 1 270 1 113 179 GLD99793.1 hypothetical protein PINS_up008521 [Pythium insidiosum] diamond 3240 60.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
31578943 31578943 PRJNA635874_P_NODE_29856_length_303_cov_1.339130_g29709_i0 PRJNA635874 29856 303 1.33913 4.0575639 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 57.8 3.55e-7   NR KAF4040277.1 4787 g29709 i0 48.1 7.59405940594059 54 28 53.5 0 303 142 190 243 KAF4040277.1 NUDIX domain-containing protein [Phytophthora infestans] diamond 2301 58.2 0.993127147766323 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
31831655 31831655 PRJNA635874_P_NODE_32477_length_293_cov_1.145455_g32330_i0 PRJNA635874 32477 293 1.145455 3.35618315 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 108 4.7e-25   NR XP_067817904.1 4779 g32330 i0 56.7 15.1740614334471 90 33 92.2 1 23 292 350 433 XP_067817904.1 hypothetical protein CCR75_007691 [Bremia lactucae] diamond 4446 109 0.990825688073395 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
31926734 31926734 PRJNA635874_P_NODE_6257_length_562_cov_2.503067_g6113_i0 PRJNA635874 6257 562 2.503067 14.06723654 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 132 4.95e-32   NR DAZ98414.1 4803 g6113 i0 69 2.87188612099644 87 27 46.4 0 17 277 595 681 DAZ98414.1 TPA: hypothetical protein N0F65_000128 [Lagenidium giganteum] diamond 1614 133 0.992481203007519 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;