RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA635874", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA635874 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27681547 27681547 PRJNA635874_P_NODE_64064_length_244_cov_0.900585_g63917_i0 PRJNA635874 64064 244 0.900585 2.1974274 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 75.9 7.849999999999999e-14   NR XP_067734144.1 2049356 g63917 i0 45 0.983606557377049 80 41 98.4 1 243 4 192 268 XP_067734144.1 putative Solute carrier family 35 member F6 [Monocercomonoides exilis] diamond 240 75.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
29777480 29777480 PRJNA635874_P_NODE_26971_length_315_cov_1.772727_g26824_i0 PRJNA635874 26971 315 1.772727 5.58409005 root 1 Root_unresolved Root_unresolved 110 2.86e-29   NR KAA6379614.1 222440 g26824 i0 58.2 1.68571428571429 91 38 86.7 0 313 41 3 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 531 111 0.990990990990991 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
32388908 32388908 PRJNA635874_P_NODE_44659_length_255_cov_1.483516_g44512_i0 PRJNA635874 44659 255 1.483516 3.7829658 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 47 0.00135   NR XP_067765802.1 348837 g44512 i0 51.4 0.435294117647059 37 16 43.5 1 249 139 107 141 XP_067765802.1 Cysteine-rich membrane protein 2 [Spironucleus salmonicida] diamond 111 47 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;