RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA635874", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 3 ✖

bioproject 1

  • PRJNA635874 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27713182 27713182 PRJNA635874_P_NODE_46664_length_251_cov_0.865169_g46517_i0 PRJNA635874 46664 251 0.865169 2.17157419 Prymnesium parvum 97485 Haptophyta other_Eukaryota 86.3 1.97e-17   NR KAL1510195.1 97485 g46517 i0 47.6 1.00398406374502 84 39 99.2 2 2 250 459 538 KAL1510195.1 hypothetical protein AB1Y20_006525 [Prymnesium parvum] diamond 252 86.3 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
29606840 29606840 PRJNA635874_P_NODE_26450_length_317_cov_3.754098_g26303_i0 PRJNA635874 26450 317 3.754098 11.900490660000001 Emiliania huxleyi CCMP1516 280463 Haptophyta other_Eukaryota 86.3 2.81e-19   NR XP_005782836.1 280463 g26303 i0 51 0.927444794952681 98 44 91.8 2 27 317 20 114 XP_005782836.1 hypothetical protein EMIHUDRAFT_442529 [Emiliania huxleyi CCMP1516] diamond 294 86.3 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
32040909 32040909 PRJNA635874_P_NODE_58918_length_246_cov_0.890173_g58771_i0 PRJNA635874 58918 246 0.890173 2.18982558 Chrysochromulina tobinii 1460289 Haptophyta other_Eukaryota 56.2 6.64e-7   NR KOO32238.1 1460289 g58771 i0 39 0.939024390243902 77 35 93.9 2 3 233 471 535 KOO32238.1 peptide-aspartate beta-dioxygenase [Chrysochromulina tobinii] diamond 231 56.2 1 Eukaryota Haptista   Haptophyta   Prymnesiales Chrysochromulinaceae Chrysochromulina Chrysochromulina tobinii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;