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contig_metadata

17 rows where bioproject = "PRJNA635397" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA635397 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6257394 6257394 PRJNA635397_P_NODE_40985_length_249_cov_8.221591_g40531_i0 PRJNA635397 40985 249 8.221591 20.47176159 Eukaryota 2759 Plants Plants 459 1.1399999999999998e-124   NTclustered gi|1714003650|gb|MN243923.1| 3079 g40531 i0 100 99.6305220883534 248 0 99 0 2 249 294 47 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 24808 459 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
14634594 14634594 PRJNA635397_P_NODE_26572_length_309_cov_2.084746_g26118_i0 PRJNA635397 26572 309 2.084746 6.44186514 Chlorophyta 3041 Plants Plants 142 1.17e-36   NR XP_003056374.1 564608 g26118 i0 71.1 11.6504854368932 97 28 94.2 0 1 291 785 881 XP_003056374.1 uncharacterized protein MICPUCDRAFT_31433 [Micromonas pusilla CCMP1545] diamond 3600 142 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas pusilla
17731560 17731560 PRJNA635397_P_NODE_16394_length_406_cov_7.195195_g15940_i0 PRJNA635397 16394 406 7.195195 29.2124917 Eukaryota 2759 Plants Plants 56.5 0.003   NTclustered gi|2082247188|ref|XM_043062858.1| 3055 g15940 i0 96.97 0.435960591133005 33 1 8 0 176 208 5341 5309 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g265950v5), mRNA blastn 177 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20280183 20280183 PRJNA635397_P_NODE_24416_length_323_cov_3.384000_g23962_i0 PRJNA635397 24416 323 3.384 10.93032 Eukaryota 2759 Plants Plants 593 4.0199999999999986e-165   NTclustered gi|1714003650|gb|MN243923.1| 3079 g23962 i0 100 99.2383900928793 321 0 99 0 1 321 533 853 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 32054 593 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
23558459 23558459 PRJNA635397_P_NODE_35799_length_264_cov_2.450262_g35345_i0 PRJNA635397 35799 264 2.450262 6.46869168 root 1 Root_unresolved Root_unresolved 111 2.82e-26   NR KAK3282172.1 36881 g35345 i0 66.3 27.6931818181818 86 29 97.7 0 2 259 179 264 KAK3282172.1 hypothetical protein CYMTET_10079 [Cymbomonas tetramitiformis] diamond 7311 111 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
24832016 24832016 PRJNA635397_P_NODE_27660_length_303_cov_1.343478_g27206_i0 PRJNA635397 27660 303 1.343478 4.07073834 Chlamydomonas reinhardtii 3055 Plants Plants 62.1 4.69e-5   NTclustered gi|2082252565|ref|XM_043065027.1| 3055 g27206 i0 100 1.09240924092409 33 0 11 0 137 169 1504 1472 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_08g370700v5), mRNA blastn 331 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
26859803 26859803 PRJNA635397_P_NODE_17681_length_388_cov_1.784127_g17227_i0 PRJNA635397 17681 388 1.784127 6.92241276 Haematococcus lacustris 44745 Plants Plants 47.4 0.00417   NR KAJ9530648.1 44745 g17227 i0 39.3 0.649484536082474 84 44 59.5 3 293 63 172 255 KAJ9530648.1 hypothetical protein QJQ45_014799, partial [Haematococcus lacustris] diamond 252 47.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
27061805 27061805 PRJNA635397_P_NODE_24842_length_320_cov_2.724696_g24388_i0 PRJNA635397 24842 320 2.724696 8.7190272 root 1 Root_unresolved Root_unresolved 87.4 1.13e-17   NR KAK3239164.1 36881 g24388 i0 37.2 3.890625 113 57 92.8 4 314 18 263 375 KAK3239164.1 hypothetical protein CYMTET_50892 [Cymbomonas tetramitiformis] diamond 1245 87.4 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
27302312 27302312 PRJNA635397_P_NODE_30403_length_288_cov_1.641860_g29949_i0 PRJNA635397 30403 288 1.64186 4.7285568 Chlamydomonas eustigma 1157962 Plants Plants 75.9 1.33e-13   NR GAX78472.1 1157962 g29949 i0 90.2 0.854166666666667 41 4 42.7 0 3 125 423 463 GAX78472.1 hypothetical protein CEUSTIGMA_g5911.t1 [Chlamydomonas eustigma] diamond 246 75.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
27472722 27472722 PRJNA635397_P_NODE_29583_length_292_cov_1.858447_g29129_i0 PRJNA635397 29583 292 1.858447 5.42666524 Viridiplantae 33090 Plants Plants 99 1.2799999999999999e-23   NR KAK3278702.1 36881 g29129 i0 50 1.95205479452055 94 45 96.6 1 284 3 90 181 KAK3278702.1 hypothetical protein CYMTET_13378 [Cymbomonas tetramitiformis] diamond 570 100 0.99 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
29165401 29165401 PRJNA635397_P_NODE_21949_length_343_cov_1.362963_g21495_i0 PRJNA635397 21949 343 1.362963 4.67496309 Cymbomonas tetramitiformis 36881 Plants Plants 144 5.499999999999999e-38   NR KAK3253051.1 36881 g21495 i0 59.6 1.98542274052478 114 46 99.7 0 2 343 285 398 KAK3253051.1 hypothetical protein CYMTET_37680 [Cymbomonas tetramitiformis] diamond 681 144 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
29291419 29291419 PRJNA635397_P_NODE_9829_length_561_cov_3.895492_g9380_i0 PRJNA635397 9829 561 3.895492 21.85371012 Auxenochlorella protothecoides 3075 Plants Plants 109 1.57e-24   NR XP_011401591.1 3075 g9380 i0 41.4 1.40641711229947 140 78 73.3 3 561 151 254 392 XP_011401591.1 Peroxiredoxin-2 [Auxenochlorella protothecoides] diamond 789 109 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
30523236 30523236 PRJNA635397_P_NODE_28453_length_298_cov_3.537778_g27999_i0 PRJNA635397 28453 298 3.537778 10.54257844 Bathycoccus prasinos 41875 Plants Plants 81.6 2.85e-18   NR XP_007515728.1 41875 g27999 i0 85 0.402684563758389 40 6 40.3 0 234 115 1 40 XP_007515728.1 predicted protein [Bathycoccus prasinos] diamond 120 81.6 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Bathycoccus Bathycoccus prasinos
30776138 30776138 PRJNA635397_P_NODE_14754_length_433_cov_2.772222_g14300_i0 PRJNA635397 14754 433 2.772222 12.00372126 Cymbomonas tetramitiformis 36881 Plants Plants 175 2.87e-49   NR KAK3253051.1 36881 g14300 i0 65.2 0.956120092378753 138 48 95.6 0 1 414 364 501 KAK3253051.1 hypothetical protein CYMTET_37680 [Cymbomonas tetramitiformis] diamond 414 175 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
31641943 31641943 PRJNA635397_P_NODE_42556_length_247_cov_1.465517_g42102_i0 PRJNA635397 42556 247 1.465517 3.61982699 Chlorellaceae 35461 Plants Plants 108 1.17e-25   NR KAL4855203.1 3077 g42102 i0 66.7 6.89878542510121 81 24 98.4 1 245 3 47 124 KAL4855203.1 Adenylylsulfatase HINT1 [Chlorella vulgaris] diamond 1704 109 0.990825688073395 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
32072474 32072474 PRJNA635397_P_NODE_46138_length_242_cov_2.218935_g45684_i0 PRJNA635397 46138 242 2.218935 5.3698227 Cymbomonas tetramitiformis 36881 Plants Plants 119 2.68e-29   NR KAK3253051.1 36881 g45684 i0 63.8 0.991735537190083 80 29 99.2 0 241 2 146 225 KAK3253051.1 hypothetical protein CYMTET_37680 [Cymbomonas tetramitiformis] diamond 240 119 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
32811490 32811490 PRJNA635397_P_NODE_21300_length_348_cov_2.774545_g20846_i0 PRJNA635397 21300 348 2.774545 9.6554166 Viridiplantae 33090 Plants Plants 57.4 3.02e-8   NR XP_007514946.1 41875 g20846 i0 56.5 0.956896551724138 46 20 39.7 0 71 208 7 52 XP_007514946.1 predicted protein [Bathycoccus prasinos] diamond 333 57.4 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Bathycoccus Bathycoccus prasinos

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;