RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA635397" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA635397 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1881584 1881584 PRJNA635397_P_NODE_11442_length_508_cov_1.940230_g10989_i0 PRJNA635397 11442 508 1.94023 9.8563684 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 822 0   NTclustered gi|1958122490|gb|CP065015.1| 2026720 g10989 i0 95.89 226.403543307087 511 15 100 6 1 508 511896 511389 Candidatus Saccharibacteria bacterium isolate Skiv_18-Q3-R9-52_BAT3C.188_fly chromosome, complete genome blastn 115013 822 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
5709667 5709667 PRJNA635397_P_NODE_46305_length_242_cov_1.372781_g45851_i0 PRJNA635397 46305 242 1.372781 3.32213002 Candidatus Saccharibacteria bacterium oral taxon 955 2572087 Bacteria Bacteria 442 1.1099999999999995e-119   NTclustered gi|1663049602|gb|CP040008.1| 2572087 g45851 i0 99.587 294.07438016528903 242 1 100 0 1 242 138842 139083 Candidatus Saccharibacteria bacterium oral taxon 955 strain PM004 chromosome, complete genome blastn 71166 442 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 955
17731563 17731563 PRJNA635397_P_NODE_16954_length_398_cov_1.458462_g16500_i0 PRJNA635397 16954 398 1.458462 5.80467876 Candidatus Southlakia 3350975 Bacteria Bacteria 649 0   NTclustered gi|2028829559|gb|CP072328.1| 713051 g16500 i0 96 72.3643216080402 400 14 100 2 1 398 906677 906278 TM7 phylum sp. oral taxon 349 strain PM007 chromosome, complete genome blastn 28801 649 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 349
18458082 18458082 PRJNA635397_P_NODE_45895_length_243_cov_0.911765_g45441_i0 PRJNA635397 45895 243 0.911765 2.21558895 Candidatus Saccharibacteria bacterium oral taxon 488 713059 Bacteria Bacteria 444 3.09e-120   NTclustered gi|2890901196|gb|CP128407.1| 713059 g45441 i0 99.588 10.9917695473251 243 1 100 0 1 243 391415 391657 Candidatus Saccharibacteria bacterium oral taxon 488 strain 106.1.1 chromosome, complete genome blastn 2671 444 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
19732234 19732234 PRJNA635397_P_NODE_20956_length_352_cov_0.910394_g20502_i0 PRJNA635397 20956 352 0.910394 3.20458688 Candidatus Saccharibacteria bacterium oral taxon 488 713059 Bacteria Bacteria 560 4.47e-155   NTclustered gi|1842065531|gb|CP040002.1| 713059 g20502 i0 95.467 402.40625 353 13 100 3 1 352 150727 150377 Candidatus Saccharibacteria bacterium oral taxon 488 strain AC002 chromosome, complete genome blastn 141647 560 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
28975830 28975830 PRJNA635397_P_NODE_41428_length_249_cov_0.886364_g40974_i0 PRJNA635397 41428 249 0.886364 2.20704636 Candidatus Nanosynbacter sp. 2725945 Bacteria Bacteria 126 2.8099999999999998e-34   NR MBF1034843.1 2725945 g40974 i0 96.8 0.759036144578313 63 2 75.9 0 3 191 148 210 MBF1034843.1 hypothetical protein [Candidatus Nanosynbacter sp.] diamond 189 126 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;