RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA635397", tax_kingdom = "Promethearchaeati" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_kingdom 1

  • Promethearchaeati · 1 ✖

bioproject 1

  • PRJNA635397 · 1 ✖

analysis 1

tax_phylum 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32357508 32357508 PRJNA635397_P_NODE_32739_length_277_cov_1.529412_g32285_i0 PRJNA635397 32739 277 1.529412 4.23647124 Promethearchaeati archaeon 2591838 Archaea Archaea 103 1.3299999999999995e-23   NR NHJ38867.1 2591838 g32285 i0 58.1 3.77978339350181 74 30 80.1 1 51 272 156 228 NHJ38867.1 NAD(P)/FAD-dependent oxidoreductase [Promethearchaeati archaeon] diamond 1047 103 1 Archaea   Promethearchaeati           Promethearchaeati archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;