RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA635397", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA635397 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13360115 13360115 PRJNA635397_P_NODE_42731_length_247_cov_0.896552_g42277_i0 PRJNA635397 42731 247 0.896552 2.21448344 Eurotatoria 2816136 Rotifera other_Eukaryota 114 7.14e-30   NR CAF0915662.1 249248 g42277 i0 90.9 14.4291497975709 66 6 80.2 0 50 247 51 116 CAF0915662.1 unnamed protein product [Adineta ricciae] diamond 3564 114 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27270524 27270524 PRJNA635397_P_NODE_13683_length_454_cov_1.561680_g13229_i0 PRJNA635397 13683 454 1.56168 7.0900272 Adineta ricciae 249248 Rotifera other_Eukaryota 108 2.13e-25   NR CAF0919776.1 249248 g13229 i0 40 1.05726872246696 160 85 99.1 5 2 451 120 278 CAF0919776.1 unnamed protein product [Adineta ricciae] diamond 480 108 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
28470659 28470659 PRJNA635397_P_NODE_33586_length_273_cov_2.325000_g33132_i0 PRJNA635397 33586 273 2.325 6.34725 Adineta steineri 433720 Rotifera other_Eukaryota 51.2 5.66e-5   NR CAF1411793.1 433720 g33132 i0 34.3 0.769230769230769 70 46 76.9 0 255 46 603 672 CAF1411793.1 unnamed protein product [Adineta steineri] diamond 210 51.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;