RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA635397", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA635397 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28375727 28375727 PRJNA635397_P_NODE_24306_length_324_cov_2.051793_g23852_i0 PRJNA635397 24306 324 2.051793 6.64780932 Lotharella oceanica 641309 SAR_Eukaryotes SAR_Eukaryotes 67.8 1.2e-12   NR AIB09582.1 641309 g23852 i0 57.4 2.64814814814815 54 23 50 0 244 83 1 54 AIB09582.1 hypothetical protein M951_chr1100 [Lotharella oceanica] diamond 858 67.8 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella oceanica
32559897 32559897 PRJNA635397_P_NODE_11999_length_493_cov_2.709524_g11546_i0 PRJNA635397 11999 493 2.709524 13.35795332 Cercozoa 136419 SAR_Eukaryotes SAR_Eukaryotes 274 4.3e-89   NR AAP79145.1 227086 g11546 i0 78 4.98985801217039 164 36 99.8 0 493 2 145 308 AAP79145.1 ferredoxin-NADP oxidoreductase, partial [Bigelowiella natans] diamond 2460 276 0.992753623188406 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;