RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA635397", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA635397 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12085294 12085294 PRJNA635397_P_NODE_38990_length_253_cov_0.988889_g38536_i0 PRJNA635397 38990 253 0.988889 2.50188917 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|1620167184|ref|XM_028681527.1| 880535 g38536 i0 100 0.110671936758893 28 0 11 0 15 42 1713 1686 Plasmodium sp. gorilla clade G2 conserved Plasmodium protein, unknown function (PADL01_0818200), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
12085469 12085469 PRJNA635397_P_NODE_5730_length_788_cov_5.566434_g5324_i0 PRJNA635397 5730 788 5.566434 43.86349992 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.022   NTclustered gi|82915279|ref|XM_723946.1| 5861 g5324 i0 100 0.0368020304568528 29 0 4 0 676 704 1236 1208 Plasmodium yoelii uncharacterized protein (PY17X_0213700), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
13359685 13359685 PRJNA635397_P_NODE_18051_length_383_cov_2.919355_g17597_i0 PRJNA635397 18051 383 2.919355 11.18112965 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.037   NTclustered gi|1620126987|ref|XM_028673264.1| 5849 g17597 i0 96.875 0.0835509138381201 32 0 8 1 321 352 1659 1629 Plasmodium gallinaceum conserved Plasmodium protein, unknown function (PGAL8A_00451200), partial mRNA blastn 32 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
23558313 23558313 PRJNA635397_P_NODE_27319_length_305_cov_1.314655_g26865_i0 PRJNA635397 27319 305 1.314655 4.00969775 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 189 2.08e-43   NTclustered gi|1027960105|ref|XM_016799852.1| 31271 g26865 i0 78.247 9.95737704918033 308 57 99 10 1 303 1186 884 Plasmodium chabaudi chabaudi 26S protease regulatory subunit 8, putative (PCHAS_1464100), partial mRNA blastn 3037 189 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
25380062 25380062 PRJNA635397_P_NODE_31240_length_284_cov_1.379147_g30786_i0 PRJNA635397 31240 284 1.379147 3.91677748 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|1843572808|ref|XM_034566233.1| 5823 g30786 i0 100 0.197183098591549 28 0 10 0 173 200 2516 2489 Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_1217200), partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
30124839 30124839 PRJNA635397_P_NODE_22292_length_340_cov_1.730337_g21838_i0 PRJNA635397 22292 340 1.730337 5.8831458 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 151 6.12e-41   NR KAF7457129.1 83540 g21838 i0 64 5.02941176470588 114 40 99.7 1 2 340 313 426 KAF7457129.1 thioredoxin reductase [Cryptosporidium felis] diamond 1710 152 0.993421052631579 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
31977503 31977503 PRJNA635397_P_NODE_47018_length_239_cov_4.234940_g46564_i0 PRJNA635397 47018 239 4.23494 10.1215066 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 106 9.51e-28   NR VWU51230.1 2600580 g46564 i0 69.7 1.90794979079498 76 23 95.4 0 238 11 16 91 VWU51230.1 60S ribosomal protein L44 [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 456 106 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;