RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA635397", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA635397 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6984102 6984102 PRJNA635397_P_NODE_23346_length_331_cov_2.224806_g22892_i0 PRJNA635397 23346 331 2.224806 7.36410786 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 148 5.87e-43   NR XP_065830102.1 121494 g22892 i0 77 15.607250755287 87 18 78.9 1 69 329 1 85 XP_065830102.1 ADP-ribosylation factor 4-like [Oscarella lobularis] diamond 5166 148 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
29701542 29701542 PRJNA635397_P_NODE_18290_length_380_cov_2.846906_g17836_i0 PRJNA635397 18290 380 2.846906 10.8182428 Oscarella lobularis 121494 Porifera other_Eukaryota 99.8 1.33e-21   NR XP_065843732.1 121494 g17836 i0 51.1 0.742105263157895 94 39 74.2 2 283 2 249 335 XP_065843732.1 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like [Oscarella lobularis] diamond 282 99.8 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;