RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA635397", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA635397 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27599152 27599152 PRJNA635397_P_NODE_42864_length_247_cov_0.890805_g42410_i0 PRJNA635397 42864 247 0.890805 2.20028835 Pseudomonadati 3379134 Bacteria Bacteria 57.8 6.38e-8   NR MCX8057364.1 2053306 g42410 i0 54.2 2.58704453441296 48 21 57.1 1 103 243 32 79 MCX8057364.1 lipocalin family protein [Ignavibacteria bacterium] diamond 639 57.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31661035 31661035 PRJNA635397_P_NODE_24417_length_323_cov_3.376000_g23963_i0 PRJNA635397 24417 323 3.376 10.90448 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 43.5 0.0359   NR HVO74617.1 2651163 g23963 i0 30.2 0.492260061919505 53 35 49.2 1 280 122 107 157 HVO74617.1 isoprenylcysteine carboxylmethyltransferase family protein [Ignavibacteriaceae bacterium] diamond 159 43.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;