RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA633835" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 5 ✖

bioproject 1

  • PRJNA633835 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8805216 8805216 PRJNA633835_S_NODE_6787_length_282_cov_0.971292_g6719_i0 PRJNA633835 6787 282 0.971292 2.73904344 root 1 Root_unresolved Root_unresolved 512 9.93e-141   NTclustered gi|57547625|tpd|BR000031.1| 10654 g6719 i0 99.291 87.4822695035461 282 2 100 0 1 282 2104 1823 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-C blastn 24670 516 0.992248062015504 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
21006239 21006239 PRJNA633835_S_NODE_5477_length_301_cov_1.627193_g5409_i0 PRJNA633835 5477 301 1.627193 4.89785093 Caudoviricetes sp. 2832643 Viruses Viruses 409 1.44e-109   NTclustered gi|2059691074|tpg|BK029454.1| 2832643 g5409 i0 91.554 1.89036544850498 296 25 98 0 6 301 2106 1811 MAG TPA_asm: Caudoviricetes sp. isolate ctOwi1, partial genome blastn 569 409 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
23556450 23556450 PRJNA633835_S_NODE_9439_length_253_cov_0.972222_g9371_i0 PRJNA633835 9439 253 0.972222 2.45972166 Adintovirus bos4377 3115894 Viruses Viruses 379 9.269999999999998e-101   NTclustered gi|2710394266|tpg|BK066823.1| 3115894 g9371 i0 99.519 8.32411067193676 208 1 82 0 1 208 5955 5748 MAG TPA_asm: Adintovirus bos4377 isolate Adinto4377 genomic sequence blastn 2106 379 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
26700906 26700906 PRJNA633835_S_NODE_3001_length_363_cov_1.379310_g2933_i0 PRJNA633835 3001 363 1.37931 5.0068953 Pimephales minnow adintovirus 2609864 Viruses Viruses 158 1.33e-44   NR DAC81401.1 2609864 g2933 i0 76.8 1.63636363636364 99 23 81.8 0 298 2 122 220 DAC81401.1 TPA_asm: integrase [Pimephales minnow adintovirus] diamond 594 158 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
31756041 31756041 PRJNA633835_S_NODE_3117_length_358_cov_2.575439_g3049_i0 PRJNA633835 3117 358 2.575439 9.22007162 Betapolyomavirus macacae 1891767 Viruses Viruses 55.5 4.53e-6   NR AAK29054.1 1891767 g3049 i0 83.9 0.259776536312849 31 5 26 0 131 39 507 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 93 55.5 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;