contig_metadata
7 rows where bioproject = "PRJNA633835" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5707434 | 5707434 | PRJNA633835_S_NODE_4805_length_313_cov_2.566667_g4737_i0 | PRJNA633835 | 4805 | 313 | 2.566667 | 8.03366771 | Gemella sanguinis | 84135 | Bacteria | Bacteria | 555 | 1.8299999999999998e-153 | NTclustered | gi|1780450472|gb|CP046313.1| | 84135 | g4737 | i0 | 98.718 | 5.86581469648562 | 312 | 4 | 99 | 0 | 2 | 313 | 1210635 | 1210324 | Gemella sanguinis strain FDAARGOS_742 chromosome, complete genome | blastn | 1836 | 555 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella sanguinis | ||
| 8256999 | 8256999 | PRJNA633835_S_NODE_5587_length_299_cov_2.384956_g5519_i0 | PRJNA633835 | 5587 | 299 | 2.384956 | 7.13101844 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 388 | 1.87e-103 | NTclustered | gi|1829987927|gb|CP050965.1| | 1379 | g5519 | i0 | 90.541 | 0.989966555183946 | 296 | 24 | 98 | 2 | 1 | 294 | 1786653 | 1786360 | Gemella haemolysans strain FDAARGOS_740 chromosome | blastn | 296 | 388 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 11355692 | 11355692 | PRJNA633835_S_NODE_889_length_542_cov_2.249467_g822_i0 | PRJNA633835 | 889 | 542 | 2.249467 | 12.19211114 | Bacteria | 2 | Bacteria | Bacteria | 996 | 0 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g822 | i0 | 99.815 | 117.557195571956 | 542 | 1 | 100 | 0 | 1 | 542 | 52 | 593 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 63716 | 996 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 16455019 | 16455019 | PRJNA633835_S_NODE_9413_length_253_cov_1.211111_g9345_i0 | PRJNA633835 | 9413 | 253 | 1.211111 | 3.06411083 | root | 1 | Root_unresolved | Root_unresolved | 453 | 5.39e-123 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g9345 | i0 | 99.203 | 101.869565217391 | 251 | 2 | 99 | 0 | 1 | 251 | 1149 | 1399 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 25773 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 30175615 | 30175615 | PRJNA633835_S_NODE_10752_length_247_cov_0.879310_g10684_i0 | PRJNA633835 | 10752 | 247 | 0.87931 | 2.1718957 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 42.4 | 0.0074 | NR | MDN8753916.1 | 1280 | g10684 | i0 | 78.9 | 0.230769230769231 | 19 | 4 | 23.1 | 0 | 188 | 244 | 14 | 32 | MDN8753916.1 hypothetical protein [Staphylococcus aureus] | diamond | 57 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 31914240 | 31914240 | PRJNA633835_S_NODE_6697_length_283_cov_1.228571_g6629_i0 | PRJNA633835 | 6697 | 283 | 1.228571 | 3.47685593 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 127 | 6.8399999999999985e-34 | NR | WP_414339826.1 | 28037 | g6629 | i0 | 98.7 | 0.837455830388693 | 79 | 1 | 83.7 | 0 | 282 | 46 | 10 | 88 | WP_414339826.1 DUF1542 domain-containing protein, partial [Streptococcus mitis] | diamond | 237 | 127 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 32483888 | 32483888 | PRJNA633835_S_NODE_9019_length_257_cov_1.103261_g8951_i0 | PRJNA633835 | 9019 | 257 | 1.103261 | 2.83538077 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 75.5 | 7.53e-16 | NR | MDN8753916.1 | 1280 | g8951 | i0 | 78.6 | 0.490272373540856 | 42 | 8 | 49 | 1 | 162 | 37 | 19 | 59 | MDN8753916.1 hypothetical protein [Staphylococcus aureus] | diamond | 126 | 75.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;