contig_metadata
24 rows where bioproject = "PRJNA631796" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 603364 | 603364 | PRJNA631796_P_NODE_6841_length_261_cov_1.475000_g6563_i0 | PRJNA631796 | 6841 | 261 | 1.475 | 3.84975 | Termitidicoccus mucosus | 1184151 | Bacteria | Bacteria | 405 | 1.59e-108 | NTclustered | gi|2724066732|gb|CP109796.1| | 1184151 | g6563 | i0 | 94.636 | 181.272030651341 | 261 | 14 | 100 | 0 | 1 | 261 | 5637139 | 5636879 | Termitidicoccus mucosus strain TSB47 chromosome, complete genome | blastn | 47312 | 405 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Termitidicoccus | Termitidicoccus mucosus | |
| 1152013 | 1152013 | PRJNA631796_P_NODE_2381_length_460_cov_2.192982_g2105_i0 | PRJNA631796 | 2381 | 460 | 2.192982 | 10.0877172 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 470 | 1.04e-127 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g2105 | i0 | 85.435 | 108.773913043478 | 460 | 57 | 98 | 9 | 1 | 453 | 85 | 541 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 50036 | 472 | 0.995762711864407 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 3154310 | 3154310 | PRJNA631796_S_NODE_12643_length_285_cov_1.915179_g12476_i0 | PRJNA631796 | 12643 | 285 | 1.915179 | 5.45826015 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 255 | 1.87e-63 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g12476 | i0 | 83.045 | 191.056140350877 | 289 | 41 | 100 | 8 | 1 | 285 | 2750277 | 2749993 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 54451 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4431078 | 4431078 | PRJNA631796_P_NODE_11824_length_206_cov_0.882759_g11546_i0 | PRJNA631796 | 11824 | 206 | 0.882759 | 1.81848354 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 135 | 1.74e-27 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g11546 | i0 | 79.147 | 39.6990291262136 | 211 | 33 | 99 | 10 | 2 | 206 | 2749669 | 2749464 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 8178 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4431164 | 4431164 | PRJNA631796_S_NODE_20244_length_266_cov_2.317073_g20077_i0 | PRJNA631796 | 20244 | 266 | 2.317073 | 6.16341418 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 219 | 2.27e-52 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g20077 | i0 | 82.836 | 296.263157894737 | 268 | 22 | 93 | 16 | 1 | 247 | 631173 | 631437 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 78806 | 219 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius | |
| 6255678 | 6255678 | PRJNA631796_P_NODE_12745_length_202_cov_2.099291_g12467_i0 | PRJNA631796 | 12745 | 202 | 2.099291 | 4.24056782 | Opitutaceae | 134623 | Bacteria | Bacteria | 324 | 3.38e-84 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g12467 | i0 | 95.545 | 134.386138613861 | 202 | 9 | 100 | 0 | 1 | 202 | 2558381 | 2558180 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 27146 | 324 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 6255698 | 6255698 | PRJNA631796_P_NODE_4905_length_312_cov_4.525896_g4627_i0 | PRJNA631796 | 4905 | 312 | 4.525896 | 14.12079552 | Opitutaceae | 134623 | Bacteria | Bacteria | 532 | 8.549999999999998e-147 | NTclustered | gi|470483113|ref|NR_076574.1| | 107709 | g4627 | i0 | 97.436 | 105.458333333333 | 312 | 8 | 100 | 0 | 1 | 312 | 848 | 1159 | Opitutus terrae strain PB90-1 23S ribosomal RNA gene, complete sequence | blastn | 32903 | 532 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus terrae | |
| 6255700 | 6255700 | PRJNA631796_P_NODE_5385_length_297_cov_1.627119_g5107_i0 | PRJNA631796 | 5385 | 297 | 1.627119 | 4.83254343 | Prosthecobacter | 48463 | Bacteria | Bacteria | 460 | 3.87e-125 | NTclustered | gi|183579826|emb|AM905423.1| | 48465 | g5107 | i0 | 94.613 | 62.6296296296296 | 297 | 16 | 100 | 0 | 1 | 297 | 1513 | 1217 | Prosthecobacter dejongeii partial 23S rRNA gene, strain DSM12251 | blastn | 18601 | 464 | 0.991379310344828 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter dejongeii | |
| 8256582 | 8256582 | PRJNA631796_P_NODE_8047_length_239_cov_2.775281_g7769_i0 | PRJNA631796 | 8047 | 239 | 2.775281 | 6.63292159 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 403 | 5.15e-108 | NTclustered | gi|2518556548|emb|OX638380.1| | 412056 | g7769 | i0 | 97.071 | 234.401673640167 | 239 | 7 | 100 | 0 | 1 | 239 | 3921009 | 3921247 | MAG: uncultured Verrucomicrobiae bacterium isolate efd5e50e-5b6a-4a0f-a0a2-e496bae301b3 genome assembly, chromosome: 1 | blastn | 56022 | 403 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10080501 | 10080501 | PRJNA631796_P_NODE_8428_length_235_cov_0.936782_g8150_i0 | PRJNA631796 | 8428 | 235 | 0.936782 | 2.2014377 | Actomonas | 3138693 | Bacteria | Bacteria | 270 | 5.3399999999999985e-68 | NTclustered | gi|573471959|gb|CP007053.1| | 794903 | g8150 | i0 | 89.623 | 24.5957446808511 | 212 | 22 | 90 | 0 | 12 | 223 | 2149892 | 2149681 | Opitutaceae bacterium TAV5, complete genome | blastn | 5780 | 272 | 0.992647058823529 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium TAV5 | ||
| 14632355 | 14632355 | PRJNA631796_P_NODE_8572_length_233_cov_1.337209_g8294_i0 | PRJNA631796 | 8572 | 233 | 1.337209 | 3.11569697 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 392 | 1.08e-104 | NTclustered | gi|105990409|gb|DQ514140.1| | 156588 | g8294 | i0 | 96.996 | 100.017167381974 | 233 | 7 | 100 | 0 | 1 | 233 | 176 | 408 | Uncultured Verrucomicrobia bacterium clone 500M1_D10 16S ribosomal RNA gene, partial sequence | blastn | 23304 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 14632366 | 14632366 | PRJNA631796_P_NODE_9512_length_223_cov_1.111111_g9234_i0 | PRJNA631796 | 9512 | 223 | 1.111111 | 2.47777753 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 300 | 6.4e-77 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g9234 | i0 | 91.743 | 130.686098654709 | 218 | 14 | 97 | 3 | 8 | 223 | 3803747 | 3803532 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 29143 | 300 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 15906189 | 15906189 | PRJNA631796_P_NODE_10973_length_209_cov_1.297297_g10695_i0 | PRJNA631796 | 10973 | 209 | 1.297297 | 2.71135073 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 292 | 9.92e-75 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g10695 | i0 | 91.866 | 180.296650717703 | 209 | 17 | 100 | 0 | 1 | 209 | 3048786 | 3048578 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 37682 | 292 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 15906236 | 15906236 | PRJNA631796_P_NODE_5213_length_302_cov_2.012448_g4935_i0 | PRJNA631796 | 5213 | 302 | 2.012448 | 6.07759296 | Prosthecobacter debontii | 48467 | Bacteria | Bacteria | 538 | 1.7699999999999994e-148 | NTclustered | gi|164510703|emb|AJ966882.1| | 48467 | g4935 | i0 | 98.684 | 130.069536423841 | 304 | 2 | 100 | 2 | 1 | 302 | 2665 | 2968 | Prosthecobacter debontii 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ala gene, tRNA-Ile gene and ITS1, strain DSM 14044 | blastn | 39281 | 538 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter debontii | |
| 15906266 | 15906266 | PRJNA631796_P_NODE_9853_length_219_cov_2.202532_g9575_i0 | PRJNA631796 | 9853 | 219 | 2.202532 | 4.82354508 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 204 | 5.0599999999999997e-48 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g9575 | i0 | 83.71 | 290.835616438356 | 221 | 31 | 100 | 5 | 1 | 219 | 2748825 | 2749042 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 63693 | 204 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 17181450 | 17181450 | PRJNA631796_S_NODE_66354_length_219_cov_1.563291_g66187_i0 | PRJNA631796 | 66354 | 219 | 1.563291 | 3.42360729 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 195 | 3.04e-45 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g66187 | i0 | 83.732 | 152.657534246575 | 209 | 30 | 95 | 4 | 1 | 207 | 913712 | 913506 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 33432 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18455480 | 18455480 | PRJNA631796_P_NODE_6335_length_272_cov_2.331754_g6057_i0 | PRJNA631796 | 6335 | 272 | 2.331754 | 6.34237088 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 464 | 2.7099999999999998e-126 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g6057 | i0 | 98.485 | 44.9264705882353 | 264 | 3 | 97 | 1 | 1 | 264 | 2558651 | 2558389 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 12220 | 464 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 19003462 | 19003462 | PRJNA631796_P_NODE_2175_length_484_cov_1.267139_g1899_i0 | PRJNA631796 | 2175 | 484 | 1.267139 | 6.13295276 | Prosthecobacter | 48463 | Bacteria | Bacteria | 717 | 0 | NTclustered | gi|183579826|emb|AM905423.1| | 48465 | g1899 | i0 | 93.388 | 166.107438016529 | 484 | 32 | 100 | 0 | 1 | 484 | 1284 | 1767 | Prosthecobacter dejongeii partial 23S rRNA gene, strain DSM12251 | blastn | 80396 | 717 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter dejongeii | |
| 22280471 | 22280471 | PRJNA631796_P_NODE_13938_length_189_cov_2.835938_g13660_i0 | PRJNA631796 | 13938 | 189 | 2.835938 | 5.35992282 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 200 | 5.47e-47 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g13660 | i0 | 85.641 | 20.8730158730159 | 195 | 22 | 100 | 4 | 1 | 189 | 3862149 | 3862343 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 3945 | 200 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 22829493 | 22829493 | PRJNA631796_P_NODE_8978_length_228_cov_3.934132_g8700_i0 | PRJNA631796 | 8978 | 228 | 3.934132 | 8.96982096 | Prosthecobacter | 48463 | Bacteria | Bacteria | 363 | 8.269999999999999e-96 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g8700 | i0 | 95.575 | 261.565789473684 | 226 | 10 | 99 | 0 | 1 | 226 | 1036 | 1261 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 59637 | 363 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 23555990 | 23555990 | PRJNA631796_P_NODE_8639_length_232_cov_2.046784_g8361_i0 | PRJNA631796 | 8639 | 232 | 2.046784 | 4.74853888 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 215 | 2.5e-51 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g8361 | i0 | 83.691 | 48.3491379310345 | 233 | 32 | 99 | 6 | 2 | 231 | 3989893 | 3989664 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 11217 | 215 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 24829720 | 24829720 | PRJNA631796_S_NODE_30100_length_251_cov_2.810526_g29933_i0 | PRJNA631796 | 30100 | 251 | 2.810526 | 7.05442026 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 267 | 7.459999999999999e-67 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g29933 | i0 | 88.584 | 253.199203187251 | 219 | 25 | 87 | 0 | 33 | 251 | 26476 | 26258 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 63553 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 28375700 | 28375700 | PRJNA631796_S_NODE_41086_length_239_cov_1.533708_g40919_i0 | PRJNA631796 | 41086 | 239 | 1.533708 | 3.66556212 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 42.7 | 0.0346 | NR | MFO1449013.1 | 2006848 | g40919 | i0 | 30.1 | 0.916317991631799 | 73 | 40 | 82.8 | 2 | 219 | 22 | 32 | 100 | MFO1449013.1 SWIM zinc finger family protein [Opitutaceae bacterium] | diamond | 219 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 30744454 | 30744454 | PRJNA631796_P_NODE_12014_length_205_cov_0.888889_g11736_i0 | PRJNA631796 | 12014 | 205 | 0.888889 | 1.82222245 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42 | 0.043 | NR | MCX6908558.1 | 2026799 | g11736 | i0 | 52.8 | 0.526829268292683 | 36 | 15 | 49.8 | 1 | 10 | 111 | 73 | 108 | MCX6908558.1 DUF4838 domain-containing protein [Verrucomicrobiota bacterium] | diamond | 108 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;