RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA631796", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

tax_phylum 1

  • Negarnaviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA631796 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27618133 27618133 PRJNA631796_S_NODE_2684_length_394_cov_1.129129_g2517_i0 PRJNA631796 2684 394 1.129129 4.44876826 Salarius guttatus piscichuvirus 2951531 Viruses Viruses 77 2.21e-13   NR UVF58767.1 2951531 g2517 i0 40.6 0.769035532994924 101 57 74.6 2 5 298 69 169 UVF58767.1 MAG: L protein [Salarius guttatus piscichuvirus] diamond 303 77 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Salarius guttatus piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;