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contig_metadata

12 rows where bioproject = "PRJNA631796" and tax_phylum = "Myxococcota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA631796 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2427304 2427304 PRJNA631796_P_NODE_9842_length_219_cov_2.626582_g9564_i0 PRJNA631796 9842 219 2.626582 5.75221458 Sorangium 39643 Bacteria Bacteria 322 1.34e-83   NTclustered gi|1566478966|gb|CP012672.1| 56 g9564 i0 94.712 129.913242009132 208 10 95 1 8 215 3690717 3690923 Sorangium cellulosum strain So ce836 chromosome, complete genome blastn 28451 322 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
8256578 8256578 PRJNA631796_P_NODE_7127_length_255_cov_2.242268_g6849_i0 PRJNA631796 7127 255 2.242268 5.7177834 Myxococcus stipitatus 83455 Bacteria Bacteria 438 1.52e-118   NTclustered gi|545790943|gb|KF270706.1| 83455 g6849 i0 97.647 224.294117647059 255 6 100 0 1 255 131 385 Myxococcus stipitatus strain Mxs33 23S ribosomal RNA gene, partial sequence blastn 57195 438 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus stipitatus
8804961 8804961 PRJNA631796_P_NODE_14127_length_182_cov_4.942149_g13849_i0 PRJNA631796 14127 182 4.942149 8.99471118 Pendulispora 3375062 Bacteria Bacteria 287 3.9e-73   NTclustered gi|2698045512|gb|CP089929.1| 2741070 g13849 i0 95.055 291.818681318681 182 9 100 0 1 182 7287298 7287117 Pendulispora rubella strain MSr11368 chromosome, complete genome blastn 53111 287 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora rubella
11355471 11355471 PRJNA631796_S_NODE_134769_length_183_cov_7.647541_g134602_i0 PRJNA631796 134769 183 7.647541 13.99500003 root 1 Root_unresolved Root_unresolved 231 1.87e-56   NTclustered gi|1338588479|gb|CP012673.1| 56 g134602 i0 89.73 190.55737704918 185 14 100 5 1 183 3450655 3450836 Sorangium cellulosum strain So ce26 chromosome, complete genome blastn 34872 233 0.991416309012876 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
13905932 13905932 PRJNA631796_P_NODE_14231_length_176_cov_7.982609_g13953_i0 PRJNA631796 14231 176 7.982609 14.04939184 Polyangiales 3031712 Bacteria Bacteria 224 2.9699999999999996e-54   NTclustered gi|913610804|gb|CP012333.1| 1391654 g13953 i0 89.773 193.772727272727 176 17 100 1 1 176 3943682 3943508 Labilithrix luteola strain DSM 27648, complete genome blastn 34104 226 0.991150442477876 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
15180406 15180406 PRJNA631796_P_NODE_152_length_1714_cov_32.822142_g82_i0 PRJNA631796 152 1714 32.822142 562.57151388 Pendulispora 3375062 Bacteria Bacteria 2268 0   NTclustered gi|2698045512|gb|CP089929.1| 2741070 g82 i0 90.598 178.389148191365 1723 145 99 14 1 1712 9852419 9854135 Pendulispora rubella strain MSr11368 chromosome, complete genome blastn 305759 2268 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora rubella
17729910 17729910 PRJNA631796_P_NODE_5714_length_288_cov_1.621145_g5436_i0 PRJNA631796 5714 288 1.621145 4.6688976 Myxococcaceae 31 Bacteria Bacteria 237 6.85e-58   NTclustered gi|545790947|gb|KF270710.1| 34 g5436 i0 81.944 215.913194444444 288 45 99 6 3 287 51 334 Myxococcus xanthus strain Mxx132 23S ribosomal RNA gene, partial sequence blastn 62183 237 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus
18455522 18455522 PRJNA631796_S_NODE_215_length_1126_cov_11.692019_g137_i0 PRJNA631796 215 1126 11.692019 131.65213394 Chondromyces crocatus 52 Bacteria Bacteria 1465 0   NTclustered gi|169977285|emb|AM946600.1| 52 g137 i0 90.115 145.888987566607 1133 104 100 7 1 1126 1418 2549 Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 blastn 164271 1465 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces crocatus
21005823 21005823 PRJNA631796_P_NODE_8237_length_237_cov_1.568182_g7959_i0 PRJNA631796 8237 237 1.568182 3.71659134 Sandaracinus amylolyticus 927083 Bacteria Bacteria 263 9.03e-66   NTclustered gi|816953346|gb|CP011125.1| 927083 g7959 i0 91.979 23.949367088607602 187 15 79 0 1 187 8616168 8616354 Sandaracinus amylolyticus strain DSM 53668, complete genome blastn 5676 263 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
27080883 27080883 PRJNA631796_P_NODE_12662_length_203_cov_0.901408_g12384_i0 PRJNA631796 12662 203 0.901408 1.82985824 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42 0.041   NR NJK31080.1 2026735 g12384 i0 34.8 1.01970443349754 69 37 90.1 1 2 184 173 241 NJK31080.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 207 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28533817 28533817 PRJNA631796_P_NODE_6267_length_274_cov_1.201878_g5989_i0 PRJNA631796 6267 274 1.201878 3.29314572 Polyangia bacterium 3058050 Bacteria Bacteria 67.8 8.19e-11   NR HEY0715797.1 3058050 g5989 i0 38.7 1.82846715328467 93 45 99.6 2 273 1 290 372 HEY0715797.1 fibro-slime domain-containing protein [Polyangia bacterium] diamond 501 67.8 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
30617918 30617918 PRJNA631796_P_NODE_10013_length_218_cov_0.815287_g9735_i0 PRJNA631796 10013 218 0.815287 1.77732566 Myxococcota bacterium 2818507 Bacteria Bacteria 42 0.0456   NR MEM6955040.1 2818507 g9735 i0 41.4 1.59633027522936 58 29 74.3 2 184 23 6 62 MEM6955040.1 UMP kinase [Myxococcota bacterium] diamond 348 42 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;