RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA631796" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA631796 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
603319 603319 PRJNA631796_P_NODE_12041_length_205_cov_0.888889_g11763_i0 PRJNA631796 12041 205 0.888889 1.82222245 Cavenderia fasciculata 261658 Evosea other_Eukaryota 128 2.89e-25   NTclustered gi|470251741|ref|XM_004358911.1| 261658 g11763 i0 79.885 7.20487804878049 174 35 85 0 22 195 903 730 Cavenderia fasciculata calreticulin (crtA), partial mRNA blastn 1477 128 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
8256563 8256563 PRJNA631796_P_NODE_4987_length_310_cov_1.574297_g4709_i0 PRJNA631796 4987 310 1.574297 4.8803207 Dictyostelium discoideum 44689 Evosea other_Eukaryota 361 4.239999999999999e-95   NTclustered gi|66821326|ref|XM_639065.1| 352472 g4709 i0 87.702 98.4774193548387 309 38 99 0 1 309 1116 808 Dictyostelium discoideum AX4 hypothetical protein (act13) mRNA, complete cds blastn 30528 361 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
13357583 13357583 PRJNA631796_P_NODE_5531_length_293_cov_1.780172_g5253_i0 PRJNA631796 5531 293 1.780172 5.21590396 Physarum compressum 647302 Evosea other_Eukaryota 531 2.86e-146   NTclustered gi|2689051973|gb|PP407201.1| 647302 g5253 i0 99.317 65.3720136518771 293 2 100 0 1 293 410 118 Physarum compressum voucher sc34212_AKo89 small subunit ribosomal RNA gene, partial sequence blastn 19154 531 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum compressum
22280464 22280464 PRJNA631796_P_NODE_12958_length_202_cov_0.907801_g12680_i0 PRJNA631796 12958 202 0.907801 1.83375802 Physarum polycephalum 5791 Evosea other_Eukaryota 224 3.52e-54   NTclustered gi|175957|gb|M19232.1|SLMRRMPP 5791 g12680 i0 86.829 2.02970297029703 205 21 100 6 1 202 101 302 Slime mold (P.polycephalum) 28S large subunit rRNA, 5' end blastn 410 224 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
31692752 31692752 PRJNA631796_P_NODE_12197_length_204_cov_2.832168_g11919_i0 PRJNA631796 12197 204 2.832168 5.77762272 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 93.2 3.9e-20   NR PRP78505.1 1890364 g11919 i0 67.6 1 68 20 100 1 204 1 50 115 PRP78505.1 hypothetical protein PROFUN_13523 [Planoprotostelium fungivorum] diamond 204 93.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32325930 32325930 PRJNA631796_P_NODE_11339_length_208_cov_0.870748_g11061_i0 PRJNA631796 11339 208 0.870748 1.81115584 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 82.4 2.42e-16   NR XP_642886.1 352472 g11061 i0 57.1 0.908653846153846 63 27 90.9 0 206 18 154 216 XP_642886.1 hypothetical protein DDB_G0277047 [Dictyostelium discoideum AX4] diamond 189 82.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
32452391 32452391 PRJNA631796_P_NODE_12019_length_205_cov_0.888889_g11741_i0 PRJNA631796 12019 205 0.888889 1.82222245 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 74.7 1.23e-13   NR PRP74595.1 1890364 g11741 i0 38.8 1.9609756097561 67 41 98 0 4 204 636 702 PRP74595.1 hypothetical protein PROFUN_15708, partial [Planoprotostelium fungivorum] diamond 402 74.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;