contig_metadata
17 rows where bioproject = "PRJNA631796", tax_phylum = "Deinococcota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 603396 | 603396 | PRJNA631796_S_NODE_1381_length_487_cov_2.683099_g1214_i0 | PRJNA631796 | 1381 | 487 | 2.683099 | 13.06669213 | Deinococcus sp. AJ005 | 2652443 | Bacteria | Bacteria | 784 | 0 | NTclustered | gi|1761809830|gb|CP044990.1| | 2652443 | g1214 | i0 | 95.697 | 341.041067761807 | 488 | 19 | 100 | 2 | 1 | 487 | 98384 | 98870 | Deinococcus sp. AJ005 chromosome, complete genome | blastn | 166087 | 784 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. AJ005 | ||
| 2427250 | 2427250 | PRJNA631796_P_NODE_1062_length_710_cov_2.221880_g815_i0 | PRJNA631796 | 1062 | 710 | 2.22188 | 15.775348 | Bacteria | 2 | Bacteria | Bacteria | 182 | 1.06e-50 | NR | WP_224605023.1 | 1656887 | g815 | i0 | 46.1 | 4.46619718309859 | 228 | 113 | 96.3 | 3 | 684 | 1 | 52 | 269 | WP_224605023.1 S8 family peptidase [Deinococcus multiflagellatus] | diamond | 3171 | 182 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus multiflagellatus | ||
| 3703694 | 3703694 | PRJNA631796_P_NODE_7103_length_255_cov_6.000000_g6825_i0 | PRJNA631796 | 7103 | 255 | 6 | 15.3 | Truepera | 332248 | Bacteria | Bacteria | 326 | 1.2399999999999999e-84 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g6825 | i0 | 89.764 | 431.533333333333 | 254 | 26 | 99 | 0 | 2 | 255 | 48 | 301 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 110041 | 326 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 4980262 | 4980262 | PRJNA631796_S_NODE_110004_length_204_cov_1.580420_g109837_i0 | PRJNA631796 | 110004 | 204 | 1.58042 | 3.2240568 | Bacteria | 2 | Bacteria | Bacteria | 374 | 3.339999999999999e-99 | NTclustered | gi|155128|gb|J04639.1|TTHTAQP1A | 271 | g109837 | i0 | 100 | 67.093137254902 | 202 | 0 | 99 | 0 | 3 | 204 | 503 | 302 | Thermus aquaticus DNA polymerase (PolI) gene | blastn | 13687 | 374 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 5706989 | 5706989 | PRJNA631796_P_NODE_13005_length_201_cov_2.857143_g12727_i0 | PRJNA631796 | 13005 | 201 | 2.857143 | 5.74285743 | Deinococcus radiopugnans | 57497 | Bacteria | Bacteria | 257 | 3.45e-64 | NTclustered | gi|730601855|gb|CP010028.1| | 57497 | g12727 | i0 | 95.122 | 104.119402985075 | 164 | 6 | 81 | 2 | 1 | 163 | 372468 | 372306 | Deinococcus swuensis strain DY59, complete genome | blastn | 20928 | 257 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiopugnans | ||
| 7529900 | 7529900 | PRJNA631796_P_NODE_3846_length_355_cov_5.326531_g3568_i0 | PRJNA631796 | 3846 | 355 | 5.326531 | 18.90918505 | Deinococcus | 1298 | Bacteria | Bacteria | 444 | 4.74e-120 | NTclustered | gi|2264081587|gb|CP094462.1| | 1299 | g3568 | i0 | 96.642 | 166.49014084507 | 268 | 7 | 75 | 2 | 1 | 268 | 881461 | 881196 | Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence | blastn | 59104 | 444 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 8804972 | 8804972 | PRJNA631796_P_NODE_387_length_1137_cov_13.812268_g247_i0 | PRJNA631796 | 387 | 1137 | 13.812268 | 157.04548716 | Deinococcus | 1298 | Bacteria | Bacteria | 1910 | 0 | NTclustered | gi|470486828|ref|NR_076782.1| | 502394 | g247 | i0 | 97.018 | 306.145118733509 | 1140 | 27 | 100 | 7 | 1 | 1137 | 1140 | 5 | Deinococcus gobiensis strain I-0 23S ribosomal RNA gene, complete sequence | blastn | 348087 | 1910 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 11355404 | 11355404 | PRJNA631796_P_NODE_12189_length_204_cov_3.300699_g11911_i0 | PRJNA631796 | 12189 | 204 | 3.300699 | 6.73342596 | Truepera | 332248 | Bacteria | Bacteria | 278 | 2.6999999999999998e-70 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g11911 | i0 | 91.176 | 140.892156862745 | 204 | 18 | 100 | 0 | 1 | 204 | 1553 | 1756 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 28742 | 278 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 14632333 | 14632333 | PRJNA631796_P_NODE_4352_length_332_cov_3.546125_g4074_i0 | PRJNA631796 | 4352 | 332 | 3.546125 | 11.773135 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 444 | 4.42e-120 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g4074 | i0 | 91.265 | 189.228915662651 | 332 | 20 | 99 | 8 | 1 | 329 | 543149 | 543474 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 62824 | 444 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 15180434 | 15180434 | PRJNA631796_P_NODE_9272_length_225_cov_2.524390_g8994_i0 | PRJNA631796 | 9272 | 225 | 2.52439 | 5.6798775 | Truepera | 332248 | Bacteria | Bacteria | 355 | 1.36e-93 | NTclustered | gi|2573973991|gb|CP133611.1| | 332249 | g8994 | i0 | 95.111 | 637.413333333333 | 225 | 11 | 100 | 0 | 1 | 225 | 946502 | 946726 | Truepera radiovictrix strain CIP 108686 chromosome, complete genome | blastn | 143418 | 355 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 18455454 | 18455454 | PRJNA631796_P_NODE_1535_length_575_cov_2.447471_g1265_i0 | PRJNA631796 | 1535 | 575 | 2.447471 | 14.07295825 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 763 | 0 | NTclustered | gi|2621701816|emb|OY759346.1| | 2026798 | g1265 | i0 | 90.55 | 490.19652173913 | 582 | 48 | 100 | 3 | 1 | 575 | 3600589 | 3601170 | MAG: Trueperaceae bacterium isolate dd143a13-9bf8-4812-ba0e-a3cf349d91ff genome assembly, chromosome: 1 | blastn | 281863 | 763 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 18455468 | 18455468 | PRJNA631796_P_NODE_455_length_1077_cov_10.688976_g291_i1 | PRJNA631796 | 455 | 1077 | 10.688976 | 115.12027152 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 1812 | 0 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g291 | i1 | 97.032 | 280.569173630455 | 1078 | 30 | 100 | 2 | 1 | 1077 | 2417696 | 2416620 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 302173 | 1812 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 19003491 | 19003491 | PRJNA631796_P_NODE_8655_length_232_cov_1.461988_g8377_i0 | PRJNA631796 | 8655 | 232 | 1.461988 | 3.39181216 | Thermus | 270 | Bacteria | Bacteria | 401 | 1.7899999999999994e-107 | NTclustered | gi|470468782|ref|NR_076136.1| | 37636 | g8377 | i0 | 97.845 | 142.620689655172 | 232 | 5 | 100 | 0 | 1 | 232 | 1467 | 1236 | Thermus scotoductus strain SA-01 23S ribosomal RNA gene, complete sequence | blastn | 33088 | 401 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 19003494 | 19003494 | PRJNA631796_P_NODE_8755_length_231_cov_1.300000_g8477_i0 | PRJNA631796 | 8755 | 231 | 1.3 | 3.003 | Deinococcus | 1298 | Bacteria | Bacteria | 427 | 2.9399999999999998e-115 | NTclustered | gi|145033|gb|M21413.1|DEIRGDA | 1299 | g8477 | i0 | 100 | 137.787878787879 | 231 | 0 | 100 | 0 | 1 | 231 | 307 | 77 | D.radiodurans 16S ribosomal RNA gene | blastn | 31829 | 427 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 19730025 | 19730025 | PRJNA631796_P_NODE_6916_length_259_cov_5.757576_g6638_i0 | PRJNA631796 | 6916 | 259 | 5.757576 | 14.91212184 | Deinococcus gobiensis | 502394 | Bacteria | Bacteria | 468 | 1.98e-127 | NTclustered | gi|379998737|gb|CP002191.1| | 745776 | g6638 | i0 | 99.231 | 255.374517374517 | 260 | 1 | 100 | 1 | 1 | 259 | 112459 | 112200 | Deinococcus gobiensis I-0, complete genome | blastn | 66142 | 468 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 24829674 | 24829674 | PRJNA631796_P_NODE_440_length_1085_cov_8.566406_g291_i0 | PRJNA631796 | 440 | 1085 | 8.566406 | 92.9455051 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 1694 | 0 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g291 | i0 | 94.945 | 218.53732718894 | 1088 | 43 | 100 | 10 | 1 | 1085 | 2341133 | 2342211 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 237113 | 1694 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 29070599 | 29070599 | PRJNA631796_S_NODE_132708_length_198_cov_3.087591_g132541_i0 | PRJNA631796 | 132708 | 198 | 3.087591 | 6.11343018 | Thermus oshimai | 56957 | Bacteria | Bacteria | 50.1 | 4.45e-6 | NR | GAA6761585.1 | 56957 | g132541 | i0 | 59.5 | 0.636363636363636 | 42 | 17 | 63.6 | 0 | 59 | 184 | 36 | 77 | GAA6761585.1 hypothetical protein Thermus77923_23180 [Thermus oshimai] | diamond | 126 | 50.1 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus oshimai |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;