RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA631796", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA631796 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18455543 18455543 PRJNA631796_S_NODE_70795_length_216_cov_2.374194_g70628_i0 PRJNA631796 70795 216 2.374194 5.12825904 Hirudo verbana 311461 Annelida Annelida 56.5 0.001   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g70628 i0 94.595 0.337962962962963 37 0 16 2 160 194 13278400 13278364 Hirudo verbana genome assembly, chromosome: 1 blastn 73 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
22280479 22280479 PRJNA631796_P_NODE_2598_length_441_cov_3.942105_g2322_i0 PRJNA631796 2598 441 3.942105 17.38468305 Hirudo verbana 311461 Annelida Annelida 56.5 0.003   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g2322 i0 94.595 0.165532879818594 37 0 8 2 72 106 13278364 13278400 Hirudo verbana genome assembly, chromosome: 1 blastn 73 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
23555939 23555939 PRJNA631796_P_NODE_12419_length_203_cov_5.204225_g12141_i0 PRJNA631796 12419 203 5.204225 10.56457675 Siboglinum fiordicum 27908 Annelida Annelida 364 2e-96   NTclustered gi|297001|emb|Z21526.1| 27908 g12141 i0 99.015 5.02463054187192 203 2 100 0 1 203 299 501 S.fiordicum 28S rRNA gene blastn 1020 364 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Siboglinum Siboglinum fiordicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;