RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA631796", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA631796 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1879576 1879576 PRJNA631796_P_NODE_8702_length_231_cov_3.741176_g8424_i0 PRJNA631796 8702 231 3.741176 8.64211656 Opisthonecta sp. FG-2015 1607889 SAR_Eukaryotes SAR_Eukaryotes 416 6.349999999999998e-112   NTclustered gi|759083562|gb|KM222179.1| 1607889 g8424 i0 99.134 95.3636363636364 231 2 100 0 1 231 370 140 Opisthonecta sp. FG-2015 voucher SZ2011052301 large subunit ribosomal RNA gene, partial sequence blastn 22029 416 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta sp. FG-2015
17729872 17729872 PRJNA631796_P_NODE_11654_length_206_cov_2.558621_g11376_i0 PRJNA631796 11654 206 2.558621 5.27075926 root 1 Root_unresolved Root_unresolved 381 2.0199999999999994e-101   NTclustered gi|363412127|gb|JN120201.1| 6026 g11376 i0 100 100.004854368932 206 0 100 0 1 206 969 764 Opisthonecta henneguyi isolate 43Opisthonectau1S1S2 18S ribosomal RNA gene, partial sequence blastn 20601 381 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta henneguyi
28533819 28533819 PRJNA631796_P_NODE_8427_length_235_cov_0.936782_g8149_i0 PRJNA631796 8427 235 0.936782 2.2014377 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00366   NR XP_012652362.1 312017 g8149 i0 48.9 1.14893617021277 45 23 57.4 0 26 160 24 68 XP_012652362.1 hypothetical protein TTHERM_000294739 [Tetrahymena thermophila SB210] diamond 270 43.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30902441 30902441 PRJNA631796_P_NODE_12194_length_204_cov_3.041958_g11916_i0 PRJNA631796 12194 204 3.041958 6.20559432 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 64.7 3.96e-10   NR KRX05960.1 266149 g11916 i0 60.8 0.75 51 20 75 0 178 26 408 458 KRX05960.1 hypothetical protein PPERSA_01038 [Pseudocohnilembus persalinus] diamond 153 64.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;