RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA631796", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA631796 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8804975 8804975 PRJNA631796_P_NODE_4107_length_344_cov_2.724382_g3829_i0 PRJNA631796 4107 344 2.724382 9.37187408 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 564 3.379999999999999e-156   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g3829 i0 96.243 186.325581395349 346 9 100 4 1 344 80124 80467 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 64096 564 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
10807591 10807591 PRJNA631796_P_NODE_2949_length_410_cov_1.693410_g2672_i0 PRJNA631796 2949 410 1.69341 6.942981 TM7 phylum sp. oral taxon 349 713051 Bacteria Bacteria 597 4.029999999999999e-166   NTclustered gi|2028829559|gb|CP072328.1| 713051 g2672 i0 93.366 71.280487804878 407 22 99 5 1 404 906293 906697 TM7 phylum sp. oral taxon 349 strain PM007 chromosome, complete genome blastn 29225 597 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 349
21553979 21553979 PRJNA631796_P_NODE_7657_length_245_cov_2.434783_g7379_i0 PRJNA631796 7657 245 2.434783 5.96521835 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 448 2.41e-121   NTclustered gi|1842065531|gb|CP040002.1| 713059 g7379 i0 99.592 171.90612244898 245 1 100 0 1 245 152085 151841 Candidatus Saccharibacteria bacterium oral taxon 488 strain AC002 chromosome, complete genome blastn 42117 448 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
22829476 22829476 PRJNA631796_P_NODE_6698_length_264_cov_1.275862_g6420_i0 PRJNA631796 6698 264 1.275862 3.36827568 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 488 1.5499999999999999e-133   NTclustered gi|1842065531|gb|CP040002.1| 713059 g6420 i0 100 197.69696969697 264 0 100 0 1 264 152302 152039 Candidatus Saccharibacteria bacterium oral taxon 488 strain AC002 chromosome, complete genome blastn 52192 488 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;