RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA631796", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA631796 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3703729 3703729 PRJNA631796_S_NODE_69683_length_217_cov_1.429487_g69516_i0 PRJNA631796 69683 217 1.429487 3.10198679 Bacteria 2 Bacteria Bacteria 183 6.51e-42   NTclustered gi|2258874820|gb|CP060231.1| 2052152 g69516 i0 83.251 175.396313364055 203 31 93 3 16 217 175652 175452 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-36 chromosome blastn 38061 183 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
21005777 21005777 PRJNA631796_P_NODE_13477_length_197_cov_2.132353_g13199_i0 PRJNA631796 13477 197 2.132353 4.20073541 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 331 1.96e-86   NTclustered gi|2258874820|gb|CP060231.1| 2052152 g13199 i0 96.954 253.58883248731 197 6 100 0 1 197 176786 176982 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-36 chromosome blastn 49957 331 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;