RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA631119", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA631119 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26700871 26700871 PRJNA631119_P_NODE_21341_length_290_cov_1.414747_g21223_i0 PRJNA631119 21341 290 1.414747 4.1027663 Zestosphaera sp. 2303494 Archaea Archaea 44.7 0.0131   NR MEM4485815.1 2303494 g21223 i0 30.7 0.775862068965517 75 52 77.6 0 1 225 73 147 MEM4485815.1 VWA domain-containing protein [Zestosphaera sp.] diamond 225 44.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Zestosphaera Zestosphaera sp.
31629532 31629532 PRJNA631119_P_NODE_14716_length_332_cov_1.486486_g14598_i0 PRJNA631119 14716 332 1.486486 4.93513352 Sulfolobales archaeon 2268200 Archaea Archaea 48.9 2.62e-4   NR MEM3904169.1 2268200 g14598 i0 37.5 1.1566265060241 64 40 57.8 0 52 243 54 117 MEM3904169.1 radical SAM protein [Sulfolobales archaeon] diamond 384 48.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales     Sulfolobales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;