RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA631119", tax_phylum = "Peploviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

tax_phylum 1

  • Peploviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA631119 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17181189 17181189 PRJNA631119_P_NODE_21834_length_288_cov_0.986047_g21716_i0 PRJNA631119 21834 288 0.986047 2.83981536 Simplexvirus macropodidalpha1 3050317 Viruses Viruses 82.4 3.4e-11   NTclustered gi|16117368|gb|AF188480.1|AF188480 137443 g21716 i0 97.872 13.1805555555556 47 1 16 0 119 165 1591 1637 Macropodid herpesvirus 1 ICP0 (RL-2), ICP34.5 (RL-1), thymidylate synthase, and ICP4 (RS-1) genes, complete cds blastn 3796 82.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus macropodidalpha1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;