RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA631119" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA631119 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24829546 24829546 PRJNA631119_P_NODE_36360_length_244_cov_1.467836_g36242_i0 PRJNA631119 36360 244 1.467836 3.58151984 Lentisphaerae bacterium ADurb.BinA184 1852901 Bacteria Bacteria 115 6.61e-28   NR OPZ31006.1 1852901 g36242 i0 66.7 0.959016393442623 78 25 95.9 1 7 240 3 79 OPZ31006.1 MAG: Hydroxylamine reductase [Lentisphaerae bacterium ADurb.BinA184] diamond 234 115 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium ADurb.BinA184
29764811 29764811 PRJNA631119_P_NODE_15471_length_326_cov_1.588933_g15353_i0 PRJNA631119 15471 326 1.588933 5.17992158 Lentisphaeria bacterium 2053569 Bacteria Bacteria 69.3 1.64e-12   NR MBO5694326.1 2053569 g15353 i0 65 0.368098159509202 40 14 36.8 0 20 139 2 41 MBO5694326.1 sel1 repeat family protein [Lentisphaeria bacterium] diamond 120 69.3 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
31249891 31249891 PRJNA631119_P_NODE_34955_length_246_cov_0.890173_g34837_i0 PRJNA631119 34955 246 0.890173 2.18982558 Victivallales bacterium 2212475 Bacteria Bacteria 57.4 2.65e-7   NR MBN2643730.1 2212475 g34837 i0 55.6 1.5 63 28 76.8 0 246 58 34 96 MBN2643730.1 hypothetical protein [Victivallales bacterium] diamond 369 57.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;