RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA631119", tax_phylum = "Fidelibacterota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA631119 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26732330 26732330 PRJNA631119_P_NODE_30241_length_253_cov_1.283333_g30123_i0 PRJNA631119 30241 253 1.283333 3.24683249 Fidelibacterota bacterium 2026760 Bacteria Bacteria 68.9 2.36e-11   NR MCF7825763.1 2026760 g30123 i0 35.9 7.35177865612648 78 50 92.5 0 6 239 265 342 MCF7825763.1 aspartate aminotransferase family protein [Fidelibacterota bacterium] diamond 1860 68.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28944410 28944410 PRJNA631119_P_NODE_33668_length_248_cov_0.880000_g33550_i0 PRJNA631119 33668 248 0.88 2.1824 Fidelibacterota bacterium 2026760 Bacteria Bacteria 49.7 1.43e-4   NR MAV64230.1 2026760 g33550 i0 35.5 0.919354838709677 76 39 91.9 1 233 6 78 143 MAV64230.1 hypothetical protein [Fidelibacterota bacterium] diamond 228 49.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32861963 32861963 PRJNA631119_P_NODE_16000_length_322_cov_1.710843_g15882_i0 PRJNA631119 16000 322 1.710843 5.50891446 Fidelibacterota bacterium 2026760 Bacteria Bacteria 48.9 2.66e-4   NR MDD3966289.1 2026760 g15882 i0 39.1 4.20186335403727 64 36 56.8 1 309 127 78 141 MDD3966289.1 peptide deformylase [Fidelibacterota bacterium] diamond 1353 48.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;