RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA631119" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA631119 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28154946 28154946 PRJNA631119_P_NODE_8005_length_418_cov_1.657971_g7887_i0 PRJNA631119 8005 418 1.657971 6.93031878 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 156 1.89e-41   NR MBP6342461.1 2035772 g7887 i0 59.8 2.64114832535885 122 49 87.6 0 370 5 444 565 MBP6342461.1 glutamine synthetase III [Candidatus Omnitrophota bacterium] diamond 1104 156 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28577796 28577796 PRJNA631119_P_NODE_9387_length_392_cov_2.520376_g9269_i0 PRJNA631119 9387 392 2.520376 9.87987392 Pseudomonadati 3379134 Bacteria Bacteria 111 6.45e-27   NR MFH2137056.1 2035772 g9269 i0 51.3 5.44132653061224 117 55 88.8 2 383 36 158 273 MFH2137056.1 4-hydroxy-tetrahydrodipicolinate synthase [Candidatus Omnitrophota bacterium] diamond 2133 112 0.991071428571429 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29493408 29493408 PRJNA631119_P_NODE_37130_length_243_cov_1.811765_g37012_i0 PRJNA631119 37130 243 1.811765 4.40258895 Bacteria 2 Bacteria Bacteria 119 1.01e-29   NR OGW69371.1 1801815 g37012 i0 70.4 4.98765432098765 81 24 100 0 243 1 79 159 OGW69371.1 MAG: phosphopyruvate hydratase [Omnitrophica bacterium GWA2_50_21] diamond 1212 119 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium GWA2_50_21

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;