RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA631119" and tax_kingdom = "Thermotogati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 9 ✖

bioproject 1

  • PRJNA631119 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7529758 7529758 PRJNA631119_P_NODE_27226_length_264_cov_1.560209_g27108_i0 PRJNA631119 27226 264 1.560209 4.11895176 root 1 Root_unresolved Root_unresolved 488 1.5499999999999999e-133   NTclustered gi|155128|gb|J04639.1|TTHTAQP1A 271 g27108 i0 100 55.5416666666667 264 0 100 0 1 264 1713 1450 Thermus aquaticus DNA polymerase (PolI) gene blastn 14663 488 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
8804844 8804844 PRJNA631119_P_NODE_29747_length_254_cov_2.701657_g29629_i0 PRJNA631119 29747 254 2.701657 6.86220878 Bacteria 2 Bacteria Bacteria 470 5.37e-128   NTclustered gi|155128|gb|J04639.1|TTHTAQP1A 271 g29629 i0 100 47.8976377952756 254 0 100 0 1 254 792 539 Thermus aquaticus DNA polymerase (PolI) gene blastn 12166 470 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
10080324 10080324 PRJNA631119_P_NODE_27048_length_265_cov_1.109375_g26930_i0 PRJNA631119 27048 265 1.109375 2.93984375 Aminithiophilus 3029078 Bacteria Bacteria 135 2.3400000000000003e-27   NTclustered gi|2041259188|gb|CP074691.1| 2268202 g26930 i0 78.605 11.3698113207547 215 38 80 8 1 211 825111 825321 Synergistota bacterium strain L-13 chromosome, complete genome blastn 3013 135 1 Bacteria   Thermotogati Synergistota         Synergistota bacterium
11355212 11355212 PRJNA631119_P_NODE_19289_length_301_cov_1.276316_g19171_i0 PRJNA631119 19289 301 1.276316 3.84171116 Mesotoga sp. 2053577 Bacteria Bacteria 155 3.559999999999999e-42   NR MCB1222954.1 2053577 g19171 i0 71 0.996677740863787 100 29 99.7 0 1 300 129 228 MCB1222954.1 molecular chaperone DnaK [Mesotoga sp.] diamond 300 155 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
14632243 14632243 PRJNA631119_P_NODE_5252_length_496_cov_3.016548_g5134_i0 PRJNA631119 5252 496 3.016548 14.96207808 Deinococcus ficus 317577 Bacteria Bacteria 54.7 0.013   NTclustered gi|1220365708|gb|CP021084.1| 317577 g5134 i0 100 0.0584677419354839 29 0 6 0 182 210 134507 134479 Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence blastn 29 54.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus ficus
27472710 27472710 PRJNA631119_P_NODE_35883_length_245_cov_0.895349_g35765_i0 PRJNA631119 35883 245 0.895349 2.19360505 FCB group 1783270 Bacteria Bacteria 45.1 0.00541   NR MEY4529876.1 1913990 g35765 i0 32.1 1.93469387755102 78 51 93.1 1 1 228 47 124 MEY4529876.1 hypothetical protein [Deinococcota bacterium] diamond 474 45.1 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
27757079 27757079 PRJNA631119_P_NODE_32624_length_249_cov_0.875000_g32506_i0 PRJNA631119 32624 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 127 6.12e-33   NR WP_110886524.1 309889 g32506 i0 69.9 7.98795180722892 83 25 100 0 249 1 247 329 WP_110886524.1 acyl-CoA dehydrogenase family protein [Deinococcus yavapaiensis] diamond 1989 128 0.9921875 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus yavapaiensis
28407369 28407369 PRJNA631119_P_NODE_22806_length_283_cov_1.428571_g22688_i0 PRJNA631119 22806 283 1.428571 4.04285593 Thermotogaceae bacterium 2268206 Bacteria Bacteria 45.4 0.00307   NR MDI3471901.1 2268206 g22688 i0 32.9 0.80565371024735 76 49 79.5 2 17 241 4 78 MDI3471901.1 uncharacterized protein [Thermotogaceae bacterium] diamond 228 45.4 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae   Thermotogaceae bacterium
31072996 31072996 PRJNA631119_P_NODE_36015_length_245_cov_0.895349_g35897_i0 PRJNA631119 36015 245 0.895349 2.19360505 FCB group 1783270 Bacteria Bacteria 57 3.62e-7   NR MDX2007146.1 1955249 g35897 i0 42.5 2.75510204081633 80 40 98 1 245 6 126 199 MDX2007146.1 G8 domain-containing protein [Meiothermus sp.] diamond 675 57 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;