RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA631119", tax_kingdom = "Promethearchaeati" and tax_phylum = "Promethearchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

  • Promethearchaeati · 2 ✖

bioproject 1

  • PRJNA631119 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28091526 28091526 PRJNA631119_P_NODE_25125_length_273_cov_0.925000_g25007_i0 PRJNA631119 25125 273 0.925 2.52525 Promethearchaeota archaeon CR_4 1849166 Archaea Archaea 52.4 9.91e-6   NR OLS12978.1 1849166 g25007 i0 34.7 3.26373626373626 75 48 81.3 1 46 267 5 79 OLS12978.1 MAG: small GTP-binding protein [Promethearchaeota archaeon CR_4] diamond 891 52.4 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
32861996 32861996 PRJNA631119_P_NODE_5880_length_473_cov_1.412500_g5762_i0 PRJNA631119 5880 473 1.4125 6.681125 Promethearchaeota archaeon 2053489 Archaea Archaea 138 1.4e-35   NR MBN1216957.1 2053489 g5762 i0 50 3.81183932346723 156 78 98.9 0 4 471 114 269 MBN1216957.1 hypothetical protein [Promethearchaeota archaeon] diamond 1803 138 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;